Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24010
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 5,009,284 | + | BWI76_RS24000 | 0.56 | -2.6 | |
| 5,009,310 | - | BWI76_RS24000 | 0.59 | -0.4 | |
| 5,009,415 | + | BWI76_RS24000 | 0.74 | +0.1 | |
| 5,009,525 | - | BWI76_RS24000 | 0.90 | +1.3 | |
| 5,009,528 | - | -0.9 | |||
| 5,009,591 | + | -0.1 | |||
| 5,009,591 | + | +0.4 | |||
| 5,009,721 | + | BWI76_RS24005 | 0.20 | -2.0 | |
| 5,009,729 | - | BWI76_RS24005 | 0.21 | +0.6 | |
| 5,009,828 | - | BWI76_RS24005 | 0.36 | -0.1 | |
| 5,009,828 | - | BWI76_RS24005 | 0.36 | -2.1 | |
| 5,010,063 | + | BWI76_RS24005 | 0.71 | +0.5 | |
| 5,010,119 | - | BWI76_RS24005 | 0.79 | -0.6 | |
| 5,010,119 | - | BWI76_RS24005 | 0.79 | -3.7 | |
| 5,010,167 | + | BWI76_RS24005 | 0.86 | +1.3 | |
| 5,010,346 | + | BWI76_RS24010 | 0.14 | +0.5 | |
| 5,010,422 | + | BWI76_RS24010 | 0.25 | +0.9 | |
| 5,010,430 | - | +1.3 | |||
| 5,010,759 | - | BWI76_RS24010 | 0.77 | +0.9 | |
| 5,010,844 | - | BWI76_RS24010 | 0.90 | +0.7 | |
| 5,011,064 | + | -3.3 |
Or see this region's nucleotide sequence