Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21535
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,509,113 | - | +2.5 | |||
4,509,113 | - | +0.4 | |||
4,509,145 | + | +1.3 | |||
4,509,160 | + | -4.0 | |||
4,509,160 | + | -2.9 | |||
4,509,168 | - | +0.2 | |||
4,509,168 | - | -0.3 | |||
4,509,232 | - | -1.3 | |||
4,509,500 | - | BWI76_RS21535 | 0.37 | +0.3 | |
4,509,529 | + | BWI76_RS21535 | 0.41 | -2.9 | |
4,509,615 | + | BWI76_RS21535 | 0.52 | -3.7 | |
4,509,633 | - | BWI76_RS21535 | 0.54 | -1.7 | |
4,509,754 | + | BWI76_RS21535 | 0.69 | +0.1 | |
4,509,777 | - | BWI76_RS21535 | 0.72 | -0.1 | |
4,509,777 | - | BWI76_RS21535 | 0.72 | -1.5 | |
4,509,799 | - | BWI76_RS21535 | 0.75 | -1.3 | |
4,509,930 | - | -1.3 | |||
4,509,964 | - | -2.4 | |||
4,510,036 | - | +1.2 | |||
4,510,073 | - | +0.8 | |||
4,510,229 | - | BWI76_RS21540 | 0.16 | -0.6 | |
4,510,277 | + | BWI76_RS21540 | 0.20 | +0.3 | |
4,510,602 | + | BWI76_RS21540 | 0.45 | -0.2 | |
4,510,833 | - | BWI76_RS21540 | 0.63 | -3.3 | |
4,510,961 | + | BWI76_RS21540 | 0.73 | -2.0 | |
4,510,969 | - | BWI76_RS21540 | 0.74 | -0.2 |
Or see this region's nucleotide sequence