Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21120
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,423,226 | + | -0.1 | |||
4,423,482 | - | BWI76_RS21115 | 0.38 | -2.4 | |
4,423,578 | - | BWI76_RS21115 | 0.49 | -2.1 | |
4,423,745 | + | BWI76_RS21115 | 0.69 | -3.0 | |
4,423,980 | + | +0.1 | |||
4,424,282 | + | BWI76_RS21120 | 0.31 | -1.9 | |
4,424,282 | + | BWI76_RS21120 | 0.31 | -1.4 | |
4,424,282 | + | BWI76_RS21120 | 0.31 | -0.7 | |
4,424,290 | - | BWI76_RS21120 | 0.32 | +1.3 | |
4,424,290 | - | -0.3 | |||
4,424,292 | - | BWI76_RS21120 | 0.33 | -1.8 | |
4,424,384 | - | BWI76_RS21120 | 0.44 | +0.9 | |
4,424,529 | + | BWI76_RS21120 | 0.63 | +0.1 | |
4,424,681 | - | BWI76_RS21120 | 0.83 | -2.3 | |
4,425,034 | - | -0.7 | |||
4,425,226 | + | BWI76_RS21125 | 0.24 | -1.6 | |
4,425,252 | + | BWI76_RS21125 | 0.26 | +0.8 | |
4,425,260 | - | BWI76_RS21125 | 0.27 | -1.0 | |
4,425,260 | - | BWI76_RS21125 | 0.27 | +2.5 | |
4,425,315 | - | BWI76_RS21125 | 0.31 | -1.9 | |
4,425,357 | - | BWI76_RS21125 | 0.35 | +1.8 | |
4,425,734 | - | BWI76_RS21125 | 0.64 | -0.1 |
Or see this region's nucleotide sequence