Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19435
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 4,057,179 | + | +2.8 | |||
| 4,057,272 | + | -1.5 | |||
| 4,057,372 | + | +1.2 | |||
| 4,057,578 | - | +0.6 | |||
| 4,057,760 | + | +0.2 | |||
| 4,057,768 | - | +1.2 | |||
| 4,057,788 | + | +0.1 | |||
| 4,058,940 | - | BWI76_RS19435 | 0.42 | -0.2 | |
| 4,059,321 | + | BWI76_RS19435 | 0.52 | +0.9 | |
| 4,059,541 | + | BWI76_RS19435 | 0.58 | -2.7 | |
| 4,060,093 | - | BWI76_RS19435 | 0.74 | +0.7 | |
| 4,060,153 | - | BWI76_RS19435 | 0.75 | -1.1 | |
| 4,060,291 | + | BWI76_RS19435 | 0.79 | +0.4 | |
| 4,060,326 | - | BWI76_RS19435 | 0.80 | +0.3 | |
| 4,060,521 | + | BWI76_RS19435 | 0.86 | +0.5 | |
| 4,061,256 | - | BWI76_RS19440 | 0.13 | +0.7 | |
| 4,061,405 | - | BWI76_RS19440 | 0.27 | +0.3 | |
| 4,061,551 | - | BWI76_RS19440 | 0.40 | +2.1 | |
| 4,061,682 | + | BWI76_RS19440 | 0.52 | +0.4 | |
| 4,061,860 | + | BWI76_RS19440 | 0.68 | +0.4 |
Or see this region's nucleotide sequence