Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19250
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 4,004,152 | - | BWI76_RS19245 | 0.26 | +0.4 | |
| 4,004,159 | - | BWI76_RS19245 | 0.27 | +4.1 | |
| 4,004,271 | - | BWI76_RS19245 | 0.42 | -0.5 | |
| 4,004,273 | + | BWI76_RS19245 | 0.42 | -2.1 | |
| 4,004,588 | + | BWI76_RS19245 | 0.83 | +0.7 | |
| 4,004,662 | - | -0.8 | |||
| 4,004,741 | + | +0.8 | |||
| 4,004,805 | - | -3.4 | |||
| 4,004,994 | + | -1.4 | |||
| 4,005,307 | - | BWI76_RS19250 | 0.17 | -0.1 | |
| 4,005,364 | - | BWI76_RS19250 | 0.21 | +0.9 | |
| 4,005,514 | - | BWI76_RS19250 | 0.33 | +0.4 | |
| 4,005,716 | - | BWI76_RS19250 | 0.50 | +0.8 | |
| 4,005,716 | - | BWI76_RS19250 | 0.50 | +1.3 | |
| 4,005,716 | - | BWI76_RS19250 | 0.50 | +0.9 | |
| 4,005,798 | + | BWI76_RS19250 | 0.56 | -0.0 | |
| 4,006,164 | + | BWI76_RS19250 | 0.86 | -0.4 | |
| 4,006,234 | + | +0.0 | |||
| 4,006,427 | + | +0.5 | |||
| 4,006,707 | - | BWI76_RS19255 | 0.12 | -0.6 | |
| 4,006,745 | - | BWI76_RS19255 | 0.13 | +0.7 | |
| 4,006,783 | + | BWI76_RS19255 | 0.14 | -1.4 | |
| 4,006,944 | + | BWI76_RS19255 | 0.19 | -1.1 | |
| 4,006,967 | - | BWI76_RS19255 | 0.20 | -3.0 | |
| 4,007,185 | - | BWI76_RS19255 | 0.27 | -0.9 | |
| 4,007,230 | - | BWI76_RS19255 | 0.28 | +0.1 | |
| 4,007,323 | - | BWI76_RS19255 | 0.31 | +0.8 |
Or see this region's nucleotide sequence