Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17570
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,647,446 | + | +1.2 | |||
3,647,446 | + | +1.6 | |||
3,647,446 | + | +0.4 | |||
3,647,446 | + | +1.4 | |||
3,647,447 | - | +0.1 | |||
3,647,571 | - | BWI76_RS17565 | 0.14 | -0.2 | |
3,647,834 | + | BWI76_RS17565 | 0.57 | +1.1 | |
3,648,411 | - | BWI76_RS17570 | 0.55 | -2.8 | |
3,648,498 | - | BWI76_RS17570 | 0.74 | +1.1 | |
3,648,905 | + | +0.1 | |||
3,648,928 | - | +0.1 | |||
3,649,014 | + | BWI76_RS17575 | 0.12 | -0.1 | |
3,649,090 | + | BWI76_RS17575 | 0.14 | -1.0 | |
3,649,186 | + | BWI76_RS17575 | 0.17 | -1.2 | |
3,649,304 | - | BWI76_RS17575 | 0.21 | +0.2 | |
3,649,522 | - | BWI76_RS17575 | 0.28 | -2.9 | |
3,649,561 | - | BWI76_RS17575 | 0.29 | +0.7 |
Or see this region's nucleotide sequence