Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15950
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,307,760 | - | BWI76_RS15945 | 0.61 | +0.8 | |
3,308,117 | - | BWI76_RS15945 | 0.88 | -1.6 | |
3,308,662 | - | BWI76_RS15950 | 0.64 | -2.8 | |
3,308,806 | + | BWI76_RS15950 | 0.84 | -2.7 | |
3,308,846 | - | +1.4 | |||
3,309,001 | + | +1.3 | |||
3,309,088 | + | +0.9 | |||
3,309,088 | + | +0.3 | |||
3,309,093 | + | +1.3 | |||
3,309,101 | - | -0.7 | |||
3,309,235 | - | BWI76_RS15955 | 0.16 | -3.1 | |
3,309,236 | - | BWI76_RS15955 | 0.16 | -1.1 | |
3,309,514 | + | BWI76_RS15955 | 0.39 | -0.2 | |
3,309,600 | + | BWI76_RS15955 | 0.46 | +0.5 |
Or see this region's nucleotide sequence