Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13610
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,834,880 | + | BWI76_RS13605 | 0.42 | -2.7 | |
2,834,898 | + | BWI76_RS13605 | 0.43 | -1.4 | |
2,835,054 | + | BWI76_RS13605 | 0.53 | -0.4 | |
2,835,243 | - | BWI76_RS13605 | 0.64 | -4.5 | |
2,835,311 | - | BWI76_RS13605 | 0.69 | -1.1 | |
2,835,591 | - | BWI76_RS13605 | 0.86 | -0.3 | |
2,835,625 | + | BWI76_RS13605 | 0.88 | +1.0 | |
2,835,625 | + | BWI76_RS13605 | 0.88 | +0.4 | |
2,835,795 | - | -2.5 | |||
2,835,936 | - | +0.8 | |||
2,835,967 | + | +0.2 | |||
2,835,999 | - | BWI76_RS13610 | 0.10 | -1.0 | |
2,836,351 | - | BWI76_RS13610 | 0.36 | -0.3 | |
2,836,576 | - | BWI76_RS13610 | 0.52 | -2.1 | |
2,836,731 | - | BWI76_RS13610 | 0.63 | -0.9 | |
2,838,041 | + | BWI76_RS13615 | 0.49 | -2.8 | |
2,838,049 | - | BWI76_RS13615 | 0.50 | +0.4 |
Or see this region's nucleotide sequence