Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13225
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,759,150 | + | -1.6 | |||
2,759,150 | + | +0.7 | |||
2,759,153 | + | -2.8 | |||
2,759,158 | - | -1.3 | |||
2,759,204 | + | +1.6 | |||
2,759,454 | + | -1.1 | |||
2,759,524 | - | -0.4 | |||
2,759,681 | - | BWI76_RS13220 | 0.41 | +1.4 | |
2,759,835 | + | BWI76_RS13220 | 0.72 | +0.5 | |
2,760,021 | - | +1.4 | |||
2,760,034 | - | +0.7 | |||
2,760,103 | - | +0.3 | |||
2,760,287 | + | BWI76_RS13225 | 0.25 | +1.3 | |
2,760,622 | + | BWI76_RS13225 | 0.61 | +0.9 | |
2,760,635 | - | BWI76_RS13225 | 0.62 | +0.3 | |
2,760,796 | + | BWI76_RS13225 | 0.80 | +0.0 | |
2,760,927 | + | +0.4 | |||
2,761,278 | + | BWI76_RS13230 | 0.16 | -1.8 | |
2,761,776 | - | BWI76_RS13230 | 0.68 | -0.6 |
Or see this region's nucleotide sequence