Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12545
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,620,552 | + | BWI76_RS12540 | 0.72 | -0.1 | |
2,620,552 | + | BWI76_RS12540 | 0.72 | -2.8 | |
2,621,035 | - | +0.1 | |||
2,621,048 | + | -1.5 | |||
2,621,120 | + | BWI76_RS12545 | 0.12 | +2.3 | |
2,621,475 | - | BWI76_RS12545 | 0.49 | +0.6 | |
2,621,475 | - | BWI76_RS12545 | 0.49 | -1.7 | |
2,622,111 | + | BWI76_RS12550 | 0.24 | +1.1 | |
2,622,264 | - | BWI76_RS12550 | 0.53 | -1.7 | |
2,622,699 | - | BWI76_RS12555 | 0.36 | -1.5 | |
2,622,699 | - | BWI76_RS12555 | 0.36 | -0.7 | |
2,622,806 | + | BWI76_RS12555 | 0.56 | +0.5 | |
2,622,814 | - | BWI76_RS12555 | 0.58 | +0.3 | |
2,622,838 | - | BWI76_RS12555 | 0.62 | +0.4 |
Or see this region's nucleotide sequence