Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10625

Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
2,242,760	+		BWI76_RS10620	0.14	-1.6
2,242,796	+		BWI76_RS10620	0.18	-2.3
2,242,888	+		BWI76_RS10620	0.26	+0.5
2,242,922	-		BWI76_RS10620	0.29	+1.8
2,242,938	+		BWI76_RS10620	0.31	-3.4
2,242,943	+		BWI76_RS10620	0.31	-0.8
2,242,949	-		BWI76_RS10620	0.32	-2.7
2,242,951	-		BWI76_RS10620	0.32	+0.6
2,243,086	+				+0.2
2,243,094	-		BWI76_RS10620	0.46	-0.4
2,243,133	-		BWI76_RS10620	0.49	-1.4
2,243,168	-		BWI76_RS10620	0.53	+1.7
2,243,194	+		BWI76_RS10620	0.55	+0.2
2,243,217	-		BWI76_RS10620	0.57	+1.6
2,243,449	+		BWI76_RS10620	0.79	-1.8
2,243,450	+		BWI76_RS10620	0.79	-0.2
2,243,464	+		BWI76_RS10620	0.80	-0.1
2,243,472	+		BWI76_RS10620	0.81	+0.8
2,243,472	-		BWI76_RS10620	0.81	-0.1
2,243,482	-		BWI76_RS10620	0.82	+2.8
2,243,484	+		BWI76_RS10620	0.82	+3.4
2,243,538	-		BWI76_RS10620	0.87	+2.0
2,243,595	+				-0.8
2,243,599	+				-0.5
2,243,608	+				+0.9
2,243,608	+				+1.2
2,243,618	-				+0.2
2,243,618	-				-1.5
2,243,629	+				-2.0
2,243,655	-				-2.6
2,243,710	-				+0.8
2,243,726	-				-2.9
2,243,734	+				+1.2
2,243,740	-				-3.0
2,243,742	-				+0.1
2,243,888	-		BWI76_RS10625	0.29	+0.9
2,243,956	+		BWI76_RS10625	0.41	+0.5
2,243,956	+		BWI76_RS10625	0.41	+0.4
2,243,966	+		BWI76_RS10625	0.43	-2.2
2,243,966	+		BWI76_RS10625	0.43	+1.2
2,243,966	+		BWI76_RS10625	0.43	-1.6
2,243,966	+		BWI76_RS10625	0.43	-2.1
2,243,966	+		BWI76_RS10625	0.43	+0.2
2,243,966	+		BWI76_RS10625	0.43	-1.4
2,243,966	+				+1.2
2,243,974	-		BWI76_RS10625	0.44	-0.4
2,243,974	-		BWI76_RS10625	0.44	-1.8
2,243,974	-		BWI76_RS10625	0.44	-0.4
2,243,974	-		BWI76_RS10625	0.44	-0.8
2,243,974	-		BWI76_RS10625	0.44	-2.9
2,243,974	-		BWI76_RS10625	0.44	+0.2
2,243,974	-		BWI76_RS10625	0.44	-1.2
2,244,023	-		BWI76_RS10625	0.53	-3.9
2,244,024	-		BWI76_RS10625	0.53	-3.3
2,244,024	-		BWI76_RS10625	0.53	+1.8
2,244,031	+		BWI76_RS10625	0.54	+0.6
2,244,031	+		BWI76_RS10625	0.54	+0.5
2,244,032	-		BWI76_RS10625	0.54	-0.4
2,244,039	-				-0.0
2,244,039	-		BWI76_RS10625	0.55	-1.4
2,244,039	-		BWI76_RS10625	0.55	+0.4
2,244,039	-		BWI76_RS10625	0.55	-1.1
2,244,047	-		BWI76_RS10625	0.57	+0.1
2,244,082	+		BWI76_RS10625	0.63	+1.2
2,244,087	+		BWI76_RS10625	0.64	+0.2
2,244,090	-		BWI76_RS10625	0.64	-0.8
2,244,090	-		BWI76_RS10625	0.64	+0.7
2,244,090	-		BWI76_RS10625	0.64	-0.4
2,244,090	-		BWI76_RS10625	0.64	+2.8
2,244,144	-		BWI76_RS10625	0.74	+0.2
2,244,188	+		BWI76_RS10625	0.82	-2.0
2,244,201	-		BWI76_RS10625	0.84	-1.6
2,244,212	+		BWI76_RS10625	0.86	-0.8
2,244,348	-				-0.4
2,244,387	+				+0.2
2,244,387	+				+1.2
2,244,387	+				-1.8
2,244,387	+				+1.2
2,244,387	+				-0.1
2,244,387	+				-0.8
2,244,388	+				-1.8
2,244,395	-				-2.1
2,244,395	-				-0.8
2,244,395	-				-0.8
2,244,396	-				+0.4
2,244,400	+				+2.0
2,244,400	+				+1.6
2,244,400	+				-1.0
2,244,400	+				-0.4
2,244,400	+				-2.4
2,244,400	+				-0.8
2,244,400	+				+0.2
2,244,400	+				-2.6
2,244,400	+				-0.8
2,244,400	+				-0.8
2,244,400	+				+1.2
2,244,400	+				+3.0
2,244,400	+				+2.2
2,244,400	+				-0.4
2,244,400	+				+1.3
2,244,400	+				-1.1
2,244,400	+				+1.5
2,244,400	+				+3.2
2,244,400	+				-2.6
2,244,400	+				-2.9
2,244,400	+				-2.5
2,244,400	+				+2.1
2,244,400	+				+1.2
2,244,400	+				-0.8
2,244,400	+				+0.3
2,244,400	+				-3.0
2,244,400	+				+2.8
2,244,400	+				+1.2
2,244,400	+				-0.4
2,244,400	+				+0.2
2,244,400	+				+0.7
2,244,400	+				-3.2
2,244,400	+				-2.6
2,244,400	+				+0.8
2,244,400	+				+0.2
2,244,400	+				-2.4
2,244,408	-				-1.4
2,244,408	-				-0.4
2,244,408	-				+1.2
2,244,408	-				-0.4
2,244,408	-				+1.4
2,244,408	-				+0.2
2,244,408	-				-1.1
2,244,408	-				-0.4
2,244,408	-				+0.2
2,244,408	-				+0.2
2,244,408	-				-2.2
2,244,408	-				-1.8
2,244,408	-				-2.9
2,244,408	-				-1.8
2,244,408	-				+0.2
2,244,408	-				+1.2
2,244,408	-				+1.2
2,244,408	-				-1.8
2,244,408	-				+1.2
2,244,408	-				-2.7
2,244,408	-				-2.1
2,244,408	-				+1.2
2,244,408	-				-0.4
2,244,432	+				+0.2
2,244,432	+				-2.4
2,244,432	+				+0.2
2,244,432	-				+0.2
2,244,432	-				+1.6
2,244,437	+				-2.1
2,244,437	+				-3.6
2,244,437	+				-3.3
2,244,437	+				-2.5
2,244,437	+				+0.2
2,244,437	+				-2.9
2,244,437	+				+1.2
2,244,437	+				+0.2
2,244,440	-				-2.1
2,244,442	+				-1.1
2,244,445	-				-0.8
2,244,445	-				-0.5
2,244,445	-				+0.1
2,244,445	-				+0.2
2,244,445	-				-1.1
2,244,445	-				-1.8
2,244,445	-				+1.2
2,244,445	-				-0.3
2,244,445	-				+2.0
2,244,445	-				-0.5
2,244,445	-				+1.2
2,244,445	-				-1.8
2,244,445	-				+1.4
2,244,445	-				+1.6
2,244,445	-				-2.0
2,244,445	-				+1.3
2,244,445	-				+0.7
2,244,445	-				+0.2
2,244,445	-				+1.4
2,244,445	-				-0.4
2,244,445	-				-1.1
2,244,445	-				+0.2
2,244,450	-				+1.2
2,244,450	-				+1.2
2,244,455	+				-2.7
2,244,502	+				+2.4
2,244,526	+				-2.4
2,244,535	+				+1.2
2,244,535	+				-3.5
2,244,541	+				-1.1
2,244,541	+				+0.8
2,244,542	+				-0.2
2,244,542	+				+1.1
2,244,552	+				+0.5
2,244,558	-				+1.2
2,244,564	+				-1.8
2,244,564	+				-0.8
2,244,566	+				-0.8
2,244,576	+				+0.0
2,244,600	+				-0.3
2,244,600	+				-0.8
2,244,610	+		BWI76_RS10630	0.11	-1.8
2,244,618	-		BWI76_RS10630	0.12	+1.8
2,244,619	+		BWI76_RS10630	0.12	-2.2
2,244,633	+		BWI76_RS10630	0.13	-2.7
2,244,633	+		BWI76_RS10630	0.13	+0.7
2,244,641	-				+4.2
2,244,688	+		BWI76_RS10630	0.18	-2.0
2,244,722	+		BWI76_RS10630	0.21	-0.7
2,244,800	+		BWI76_RS10630	0.28	+0.7
2,244,800	+		BWI76_RS10630	0.28	-4.3
2,244,800	+		BWI76_RS10630	0.28	+0.0
2,244,800	+		BWI76_RS10630	0.28	-2.4
2,244,800	+		BWI76_RS10630	0.28	-1.2
2,244,823	+		BWI76_RS10630	0.31	-0.8
2,244,849	-		BWI76_RS10630	0.33	-2.1
2,244,880	+		BWI76_RS10630	0.36	-2.5
2,244,880	+		BWI76_RS10630	0.36	+0.2
2,244,880	+				+1.2
2,244,883	-		BWI76_RS10630	0.36	-0.4
2,244,888	-		BWI76_RS10630	0.37	-1.1
2,244,888	-		BWI76_RS10630	0.37	-0.8
2,244,897	-		BWI76_RS10630	0.38	+0.9
2,244,897	-				-1.1
2,245,002	-		BWI76_RS10630	0.47	-2.5
2,245,002	-		BWI76_RS10630	0.47	-0.6
2,245,045	+		BWI76_RS10630	0.51	-0.8
2,245,045	+		BWI76_RS10630	0.51	+0.6
2,245,046	-		BWI76_RS10630	0.51	+0.2
2,245,056	-		BWI76_RS10630	0.52	+0.6
2,245,056	-		BWI76_RS10630	0.52	+1.2
2,245,123	+		BWI76_RS10630	0.59	+1.3
2,245,123	+		BWI76_RS10630	0.59	-1.4
2,245,131	-		BWI76_RS10630	0.59	-0.4
2,245,131	-		BWI76_RS10630	0.59	-0.4
2,245,176	+		BWI76_RS10630	0.64	-1.8
2,245,192	+		BWI76_RS10630	0.65	-1.1
2,245,200	-		BWI76_RS10630	0.66	+1.2