Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07820
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,657,029 | - | BWI76_RS07815 | 0.37 | -3.4 | |
1,657,270 | - | BWI76_RS07815 | 0.56 | -1.9 | |
1,657,318 | + | BWI76_RS07815 | 0.60 | +0.2 | |
1,657,363 | - | BWI76_RS07815 | 0.63 | +0.0 | |
1,657,724 | + | -0.1 | |||
1,657,825 | + | +0.8 | |||
1,658,006 | + | -0.4 | |||
1,658,024 | + | +1.1 | |||
1,658,800 | + | BWI76_RS07820 | 0.71 | -3.7 | |
1,658,927 | - | BWI76_RS07820 | 0.82 | -3.2 | |
1,659,263 | - | +0.9 | |||
1,659,270 | - | +0.5 | |||
1,659,276 | - | -0.9 | |||
1,659,344 | + | +0.1 | |||
1,659,450 | + | BWI76_RS07825 | 0.20 | +0.2 | |
1,659,536 | - | BWI76_RS07825 | 0.28 | +0.3 | |
1,659,831 | - | BWI76_RS07825 | 0.57 | +1.0 | |
1,659,831 | - | BWI76_RS07825 | 0.57 | -0.7 | |
1,659,831 | - | BWI76_RS07825 | 0.57 | -1.1 | |
1,659,885 | - | BWI76_RS07825 | 0.62 | +0.5 | |
1,659,920 | - | BWI76_RS07825 | 0.66 | +0.9 | |
1,660,053 | - | BWI76_RS07825 | 0.78 | -0.8 | |
1,660,136 | - | BWI76_RS07825 | 0.86 | +0.4 |
Or see this region's nucleotide sequence