Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07595
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,607,365 | - | BWI76_RS07590 | 0.61 | -3.7 | |
1,607,437 | - | BWI76_RS07590 | 0.70 | +0.7 | |
1,607,671 | - | -0.9 | |||
1,607,697 | + | -2.9 | |||
1,607,788 | - | +0.1 | |||
1,607,788 | - | +1.0 | |||
1,607,813 | - | +0.4 | |||
1,607,923 | - | -1.9 | |||
1,607,930 | + | +0.2 | |||
1,607,938 | - | +2.0 | |||
1,608,157 | - | -0.6 | |||
1,608,157 | - | +0.9 | |||
1,608,249 | - | +0.7 | |||
1,608,347 | - | BWI76_RS07595 | 0.14 | +0.2 | |
1,608,352 | + | BWI76_RS07595 | 0.14 | -1.1 | |
1,608,570 | - | BWI76_RS07595 | 0.43 | -3.9 | |
1,608,873 | - | BWI76_RS07595 | 0.82 | +0.2 | |
1,609,040 | + | +1.8 | |||
1,609,215 | - | +0.6 | |||
1,609,287 | + | +1.1 | |||
1,609,588 | + | BWI76_RS07600 | 0.30 | +2.4 | |
1,609,588 | + | BWI76_RS07600 | 0.30 | +0.5 | |
1,609,588 | + | BWI76_RS07600 | 0.30 | -4.8 | |
1,609,596 | - | BWI76_RS07600 | 0.30 | -2.1 | |
1,609,779 | - | BWI76_RS07600 | 0.44 | +0.4 |
Or see this region's nucleotide sequence