Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20475
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,285,936 | - | BWI76_RS20470 | 0.62 | -2.3 | |
4,285,936 | - | BWI76_RS20470 | 0.62 | +1.0 | |
4,286,048 | + | BWI76_RS20470 | 0.70 | +0.4 | |
4,286,057 | + | BWI76_RS20470 | 0.71 | -0.1 | |
4,286,161 | - | BWI76_RS20470 | 0.79 | -1.1 | |
4,286,189 | - | BWI76_RS20470 | 0.81 | +0.6 | |
4,286,558 | + | +0.5 | |||
4,286,807 | - | BWI76_RS20475 | 0.38 | -1.1 | |
4,287,003 | + | BWI76_RS20475 | 0.64 | -2.3 | |
4,287,101 | + | BWI76_RS20475 | 0.77 | -0.8 | |
4,287,126 | - | BWI76_RS20475 | 0.80 | +0.1 | |
4,287,163 | + | BWI76_RS20475 | 0.85 | -1.7 | |
4,287,474 | + | +0.0 | |||
4,287,557 | - | +1.5 | |||
4,287,646 | - | BWI76_RS20480 | 0.12 | +1.2 | |
4,287,713 | - | BWI76_RS20480 | 0.20 | -0.3 | |
4,287,715 | - | BWI76_RS20480 | 0.20 | +0.4 | |
4,287,853 | + | BWI76_RS20480 | 0.36 | +0.0 | |
4,288,041 | - | BWI76_RS20480 | 0.57 | +1.5 | |
4,288,213 | - | BWI76_RS20480 | 0.76 | -0.9 | |
4,288,216 | + | BWI76_RS20480 | 0.76 | -0.4 | |
4,288,254 | + | BWI76_RS20480 | 0.80 | +0.6 |
Or see this region's nucleotide sequence