Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19850
Experiment: LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,149,976 | + | BWI76_RS19845 | 0.49 | -0.4 | |
4,149,999 | + | BWI76_RS19845 | 0.50 | -0.3 | |
4,150,352 | + | BWI76_RS19845 | 0.71 | +0.4 | |
4,150,429 | + | BWI76_RS19845 | 0.75 | +0.4 | |
4,150,603 | + | BWI76_RS19845 | 0.85 | +0.5 | |
4,150,661 | - | BWI76_RS19845 | 0.88 | +0.4 | |
4,150,717 | + | -0.1 | |||
4,150,970 | - | BWI76_RS19850 | 0.29 | -2.1 | |
4,150,970 | - | BWI76_RS19850 | 0.29 | -1.0 | |
4,150,977 | + | BWI76_RS19850 | 0.38 | -0.7 | |
4,151,335 | - | BWI76_RS19855 | 0.12 | -0.2 | |
4,151,335 | - | BWI76_RS19855 | 0.12 | -1.7 | |
4,151,447 | - | BWI76_RS19855 | 0.22 | -0.2 | |
4,151,480 | + | BWI76_RS19855 | 0.25 | -0.7 | |
4,151,513 | - | BWI76_RS19855 | 0.28 | +0.9 | |
4,151,622 | + | BWI76_RS19855 | 0.38 | +0.6 |
Or see this region's nucleotide sequence