Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04395

Experiment: Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
905,952	+		BWI76_RS04385	0.78	-1.4
905,961	+		BWI76_RS04385	0.79	+0.9
905,969	-		BWI76_RS04385	0.79	-1.4
905,975	-		BWI76_RS04385	0.79	-2.4
905,975	-		BWI76_RS04385	0.79	-0.3
905,975	-		BWI76_RS04385	0.79	-1.5
906,041	+		BWI76_RS04385	0.82	+0.0
906,051	+				-0.1
906,055	+		BWI76_RS04385	0.83	-1.3
906,055	+		BWI76_RS04385	0.83	-0.2
906,055	+		BWI76_RS04385	0.83	+1.2
906,055	-		BWI76_RS04385	0.83	-2.3
906,063	-		BWI76_RS04385	0.83	-0.7
906,063	-		BWI76_RS04385	0.83	+4.1
906,063	-		BWI76_RS04385	0.83	-1.9
906,070	-		BWI76_RS04385	0.83	+0.9
906,130	-		BWI76_RS04385	0.86	+0.9
906,130	-		BWI76_RS04385	0.86	-1.4
906,130	-		BWI76_RS04385	0.86	+0.2
906,130	-		BWI76_RS04385	0.86	+0.7
906,144	+		BWI76_RS04385	0.87	-0.4
906,144	+		BWI76_RS04385	0.87	+0.4
906,144	+		BWI76_RS04385	0.87	+0.6
906,152	-		BWI76_RS04385	0.87	-0.9
906,159	+		BWI76_RS04385	0.87	+1.0
906,162	+		BWI76_RS04385	0.87	-1.9
906,162	-		BWI76_RS04385	0.87	-1.3
906,162	-		BWI76_RS04385	0.87	-0.7
906,167	-		BWI76_RS04385	0.88	-3.0
906,169	+		BWI76_RS04385	0.88	+0.4
906,177	-		BWI76_RS04385	0.88	-2.3
906,182	+		BWI76_RS04385	0.88	-0.1
906,190	+		BWI76_RS04385	0.89	-0.9
906,190	+		BWI76_RS04385	0.89	+0.9
906,190	+		BWI76_RS04385	0.89	+0.6
906,190	+		BWI76_RS04385	0.89	-3.2
906,190	-		BWI76_RS04385	0.89	+1.0
906,200	+		BWI76_RS04385	0.89	-0.5
906,219	+		BWI76_RS04385	0.90	-3.9
906,219	+				+0.2
906,227	-				+1.1
906,236	+				-1.0
906,244	-				+0.6
906,244	-				+1.4
906,265	-				+1.5
906,270	+				-1.0
906,271	+				+0.9
906,323	+				-1.7
906,323	+				-0.5
906,323	+				+3.9
906,323	+				+0.9
906,323	+				+0.3
906,323	+				+0.7
906,323	+				+0.7
906,323	+				+0.0
906,323	+				-0.3
906,323	+				-1.9
906,323	+				-1.9
906,323	+				-0.9
906,323	+				+0.6
906,323	+				+1.9
906,323	+				-0.7
906,323	+				-0.7
906,323	+				-0.4
906,323	+				+1.4
906,323	+				+0.6
906,323	+				+0.2
906,323	+				-3.1
906,323	+				-3.3
906,323	+				-0.9
906,323	+				-0.8
906,328	-				-3.2
906,331	-				-2.3
906,331	-				-2.8
906,331	-				-0.1
906,331	-				-2.9
906,331	-				-1.9
906,331	-				-2.4
906,331	-				+0.9
906,331	-				-1.0
906,331	-				-3.6
906,331	-				-1.7
906,331	-				-0.7
906,331	-				-0.9
906,331	-				-1.7
906,331	-				-0.9
906,331	-				-1.9
906,331	-				+1.3
906,331	-				+0.9
906,331	-				-1.1
906,331	-				+1.8
906,331	-				-0.7
906,331	-				-0.6
906,333	-				-2.4
906,335	+				-1.1
906,335	+				+0.8
906,343	-				-1.8
906,343	-				-3.2
906,382	-				-0.7
906,445	+				-2.5
906,445	+				+0.5
906,453	-				+0.9
906,453	-				-3.0
906,504	+				+0.3
906,523	-				+0.5
906,530	+				-1.4
906,539	-				+0.7
906,547	+				+0.4
906,547	+				-0.2
906,555	-				+0.9
906,561	+				-1.1
906,565	-				-0.3
906,567	+				-2.1
906,567	+				-0.8
906,569	-				-0.3
906,569	-				+1.9
906,569	-				+0.9
906,569	-				-0.1
906,572	+				-0.6
906,572	+				-0.9
906,577	+				+1.1
906,577	+				+0.1
906,599	+				-0.1
906,608	+				-0.5
906,608	+				-0.3
906,608	+				-0.2
906,608	+				+0.1
906,608	+				+1.2
906,608	+				-0.1
906,608	+				-0.0
906,608	+				+0.1
906,608	+				+0.2
906,614	+				-0.7
906,615	+				-0.0
906,615	+				+1.3
906,615	+				-0.7
906,615	+				-3.7
906,616	-				-0.9
906,616	-				-0.1
906,616	-				-1.4
906,617	+				+0.7
906,623	-				+1.0
906,623	-				-0.8
906,623	-				-2.1
906,623	-				-0.1
906,623	-				+1.0
906,649	-				+1.0
906,664	+				-2.6
906,691	-		BWI76_RS04390	0.15	+0.4
906,695	+		BWI76_RS04390	0.16	+0.0
906,742	+		BWI76_RS04390	0.29	+1.2
906,742	+		BWI76_RS04390	0.29	+0.7
906,782	+		BWI76_RS04390	0.40	-1.4
906,785	-		BWI76_RS04390	0.41	+1.9
906,787	+		BWI76_RS04390	0.42	-0.9
906,790	-		BWI76_RS04390	0.42	+0.8
906,792	+		BWI76_RS04390	0.43	-0.1
906,795	-		BWI76_RS04390	0.44	-1.9
906,824	+		BWI76_RS04390	0.52	+1.4
906,832	-		BWI76_RS04390	0.54	+1.8
906,845	+		BWI76_RS04390	0.58	+0.8
906,851	-		BWI76_RS04390	0.59	-0.5
906,853	-		BWI76_RS04390	0.60	+1.3
906,853	-		BWI76_RS04390	0.60	-1.5
906,868	+		BWI76_RS04390	0.64	+0.6
906,887	+		BWI76_RS04390	0.69	-1.4
906,893	+		BWI76_RS04390	0.71	-2.1
906,926	-		BWI76_RS04390	0.80	-0.1
906,955	+				+0.5
906,957	+				-0.0
906,963	-				-1.4
906,968	-				+0.1
906,978	-				-0.7
907,036	-		BWI76_RS04395	0.11	+0.1
907,055	+		BWI76_RS04395	0.13	+0.3
907,060	-		BWI76_RS04395	0.14	+0.9
907,073	-		BWI76_RS04395	0.15	-0.1
907,197	+		BWI76_RS04395	0.28	+1.4
907,425	+		BWI76_RS04395	0.52	-0.1
907,457	-		BWI76_RS04395	0.56	+1.9
907,735	+		BWI76_RS04395	0.85	+0.8
907,749	-		BWI76_RS04395	0.87	+2.8
907,957	+				+0.5
907,964	+				-0.7
908,164	+		BWI76_RS04400	0.31	+0.1
908,177	-		BWI76_RS04400	0.33	-3.4
908,247	+		BWI76_RS04400	0.44	+0.1
908,273	+				-0.1
908,321	-		BWI76_RS04400	0.56	+0.7
908,336	-		BWI76_RS04400	0.58	-0.0
908,365	-		BWI76_RS04400	0.63	+1.9
908,497	-		BWI76_RS04400	0.84	-1.9
908,509	+		BWI76_RS04400	0.86	+1.2
908,595	-				-1.7
908,740	+		BWI76_RS04405	0.14	-0.8
908,753	-		BWI76_RS04405	0.16	-1.9
908,753	-		BWI76_RS04405	0.16	-1.3
908,836	-		BWI76_RS04405	0.28	-1.4
908,843	+		BWI76_RS04405	0.29	+0.4
908,850	-		BWI76_RS04405	0.30	+0.8
908,855	+		BWI76_RS04405	0.30	-1.0