Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0214
Experiment: MoLS4 without Choline Chloride with Casaminos (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoLS4 without Choline Chloride with Casaminos (vit. assay) 0.05% |
|---|---|---|---|---|---|
| remove | |||||
| 253,473 | + | DVU0213 | 0.34 | -0.4 | |
| 253,577 | - | DVU0213 | 0.41 | -0.0 | |
| 253,623 | + | DVU0213 | 0.44 | -1.8 | |
| 253,674 | + | DVU0213 | 0.47 | -0.9 | |
| 253,683 | - | DVU0213 | 0.48 | +0.1 | |
| 253,754 | + | DVU0213 | 0.53 | -0.7 | |
| 253,754 | + | DVU0213 | 0.53 | +1.0 | |
| 253,754 | + | DVU0213 | 0.53 | +0.8 | |
| 253,769 | + | DVU0213 | 0.54 | -2.0 | |
| 253,803 | - | DVU0213 | 0.56 | -0.4 | |
| 254,203 | - | DVU0213 | 0.83 | +0.4 | |
| 254,218 | - | DVU0213 | 0.84 | +0.1 | |
| 255,244 | + | DVU0214 | 0.65 | -0.7 | |
| 255,249 | + | DVU0214 | 0.65 | -2.5 | |
| 255,268 | - | DVU0214 | 0.67 | -0.3 | |
| 255,563 | - | +0.0 | |||
| 255,932 | - | DVU0215 | 0.13 | +0.9 | |
| 256,100 | + | DVU0215 | 0.27 | -0.3 | |
| 256,105 | + | DVU0215 | 0.28 | +0.1 | |
| 256,167 | - | DVU0215 | 0.33 | +1.3 | |
| 256,173 | - | DVU0215 | 0.34 | -0.3 | |
| 256,180 | - | DVU0215 | 0.34 | -0.1 | |
| 256,287 | + | DVU0215 | 0.44 | -0.0 | |
| 256,337 | + | DVU0215 | 0.48 | +0.2 | |
| 256,376 | - | DVU0215 | 0.52 | -1.0 |
Or see this region's nucleotide sequence