Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0087
Experiment: MoLS4 without Choline Chloride with Casaminos (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoLS4 without Choline Chloride with Casaminos (vit. assay) 0.05% |
|---|---|---|---|---|---|
| remove | |||||
| 111,502 | + | -0.2 | |||
| 111,508 | - | -0.5 | |||
| 111,508 | - | +1.6 | |||
| 111,510 | - | -0.0 | |||
| 111,513 | + | -1.1 | |||
| 111,632 | + | +0.7 | |||
| 111,687 | + | -0.2 | |||
| 111,729 | + | -0.2 | |||
| 111,803 | + | +0.1 | |||
| 111,819 | + | +0.7 | |||
| 111,860 | + | +0.2 | |||
| 111,938 | - | -1.4 | |||
| 111,952 | - | DVU0087 | 0.10 | -1.2 | |
| 111,965 | + | DVU0087 | 0.13 | -1.2 | |
| 112,013 | + | DVU0087 | 0.22 | -2.4 | |
| 112,146 | - | DVU0087 | 0.49 | -1.1 | |
| 112,241 | - | DVU0087 | 0.68 | -0.7 | |
| 112,356 | + | -0.2 | |||
| 112,404 | + | -1.2 | |||
| 112,412 | - | -0.2 | |||
| 112,451 | + | -2.6 | |||
| 112,513 | + | +0.7 | |||
| 112,515 | + | -0.6 | |||
| 112,515 | + | -0.8 | |||
| 112,744 | - | DVU0088 | 0.24 | -0.6 | |
| 112,857 | + | DVU0088 | 0.31 | -0.1 | |
| 112,964 | + | DVU0088 | 0.38 | +0.2 | |
| 113,046 | + | DVU0088 | 0.44 | -0.4 | |
| 113,058 | + | DVU0088 | 0.45 | -1.1 | |
| 113,162 | - | DVU0088 | 0.52 | -0.4 | |
| 113,177 | - | DVU0088 | 0.53 | -1.8 | |
| 113,177 | - | DVU0088 | 0.53 | +1.1 | |
| 113,285 | + | DVU0088 | 0.60 | -2.1 | |
| 113,345 | + | DVU0088 | 0.64 | -0.8 | |
| 113,353 | - | DVU0088 | 0.65 | -1.5 |
Or see this region's nucleotide sequence