Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3311

Experiment: MoLS4 without Choline Chloride with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without Choline Chloride with Casaminos (vit. assay) 0.05%
3,487,429	+	deaD	DVU3310	0.52	-0.2
3,487,452	-	deaD	DVU3310	0.54	-0.2
3,487,457	-	deaD	DVU3310	0.54	+0.1
3,487,515	-	deaD	DVU3310	0.58	-0.4
3,487,845	-	deaD	DVU3310	0.78	+0.1
3,487,922	+	deaD	DVU3310	0.83	+0.3
3,488,172	+				+0.0
3,488,172	+				-0.4
3,488,180	-				+0.0
3,488,180	-				+0.3
3,488,261	+				+0.1
3,488,261	+				+0.2
3,488,409	-		DVU3311	0.17	-1.9
3,488,478	-		DVU3311	0.56	-0.1
3,488,534	-		DVU3311	0.88	-1.5
3,488,535	-		DVU3311	0.88	-0.5
3,488,546	-				-0.4
3,488,558	-				+0.0
3,488,568	+				-0.1
3,488,571	-				+0.0
3,488,608	-				-0.0
3,488,618	+				+0.7
3,488,618	+				-1.4
3,488,626	-				-1.8
3,488,675	+				-0.9
3,488,675	+				-0.2
3,488,870	+		DVU3312	0.39	+1.3
3,488,876	+		DVU3312	0.40	-0.1
3,488,971	-		DVU3312	0.61	-0.4
3,488,972	+		DVU3312	0.61	+0.3
3,489,011	+		DVU3312	0.70	-1.4
3,489,019	-		DVU3312	0.72	-0.4
3,489,039	+		DVU3312	0.76	-0.0
3,489,047	-		DVU3312	0.78	-0.6
3,489,059	-		DVU3312	0.80	+0.2
3,489,119	+				+0.2
3,489,218	+				-0.1
3,489,351	+		DVU3313	0.19	-0.3
3,489,359	-		DVU3313	0.20	-0.5
3,489,359	-		DVU3313	0.20	-2.0
3,489,424	+		DVU3313	0.28	-0.4
3,489,485	+		DVU3313	0.34	-1.5
3,489,520	-		DVU3313	0.38	-0.6
3,489,533	-		DVU3313	0.40	-0.9
3,489,550	+		DVU3313	0.42	+0.2