Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29370

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
6,523,899	+		PFLU_RS29360	0.64	+1.2
6,524,011	-				+1.6
6,524,019	+				-1.8
6,524,020	-				-1.7
6,524,048	+				+0.4
6,524,049	-				-0.7
6,524,052	+				+0.5
6,524,052	+				+0.4
6,524,052	+				+0.4
6,524,052	+				+1.5
6,524,052	+				+2.2
6,524,052	+				+0.0
6,524,052	+				+0.7
6,524,052	+				+2.1
6,524,052	+				+0.3
6,524,052	+				-0.2
6,524,052	+				+0.9
6,524,052	+				+1.6
6,524,052	+				+1.5
6,524,052	+				-1.2
6,524,053	-				+1.2
6,524,053	-				+1.7
6,524,053	-				+1.9
6,524,053	-				+0.2
6,524,053	-				+1.9
6,524,053	-				+0.5
6,524,053	-				+3.6
6,524,053	-				+0.8
6,524,053	-				+0.9
6,524,053	-				-1.0
6,524,121	+				+2.5
6,524,121	+				+2.3
6,524,121	+				+1.2
6,524,121	+				+1.5
6,524,121	+				+0.2
6,524,121	+				+1.5
6,524,121	+				+2.0
6,524,121	+				+0.7
6,524,122	-				-2.4
6,524,122	-				+1.2
6,524,122	-				+1.6
6,524,123	+				+0.5
6,524,123	+				+1.1
6,524,123	+				+1.3
6,524,124	-				+1.2
6,524,124	-				-2.0
6,524,154	+				+0.5
6,524,154	+				+1.1
6,524,155	-				+1.8
6,524,155	-				-0.5
6,524,155	-				-0.7
6,524,158	-				-0.4
6,524,158	-				+0.2
6,524,158	-				+0.8
6,524,161	+				-2.6
6,524,161	+				-0.5
6,524,161	+				+2.1
6,524,161	-				-1.0
6,524,162	-				-1.7
6,524,162	-				-0.3
6,524,162	-				+0.4
6,524,162	-				+2.0
6,524,162	-				+0.3
6,524,187	-				+1.4
6,524,187	-				-1.1
6,524,226	+				+1.4
6,524,226	+				-1.2
6,524,226	+				-1.1
6,524,226	+				-2.2
6,524,226	+				+2.1
6,524,226	+				-0.5
6,524,226	+				+2.8
6,524,226	+				-1.1
6,524,227	-				+0.2
6,524,227	-				-1.2
6,524,227	-				+1.3
6,524,227	-				-0.9
6,524,227	-				-1.5
6,524,227	-				-1.2
6,524,227	-				+0.5
6,524,227	-				-1.3
6,524,232	+				+0.4
6,524,232	+				+3.1
6,524,232	+				+2.2
6,524,233	-				+0.6
6,524,319	+		PFLU_RS29365	0.16	-0.3
6,524,319	+		PFLU_RS29365	0.16	-1.1
6,524,319	+		PFLU_RS29365	0.16	+0.4
6,524,319	+		PFLU_RS29365	0.16	+0.7
6,524,319	+		PFLU_RS29365	0.16	+1.4
6,524,319	+		PFLU_RS29365	0.16	-0.9
6,524,319	+		PFLU_RS29365	0.16	+0.2
6,524,319	+		PFLU_RS29365	0.16	-1.2
6,524,319	+		PFLU_RS29365	0.16	-0.8
6,524,320	-		PFLU_RS29365	0.16	+0.8
6,524,320	-		PFLU_RS29365	0.16	-0.1
6,524,320	-		PFLU_RS29365	0.16	-0.8
6,524,320	-		PFLU_RS29365	0.16	+0.8
6,524,320	-		PFLU_RS29365	0.16	+0.4
6,524,320	-		PFLU_RS29365	0.16	-1.1
6,524,320	-		PFLU_RS29365	0.16	+0.1
6,524,320	-		PFLU_RS29365	0.16	-1.4
6,524,320	-		PFLU_RS29365	0.16	+0.8
6,524,320	-		PFLU_RS29365	0.16	-0.7
6,524,322	+		PFLU_RS29365	0.17	-0.4
6,524,322	+		PFLU_RS29365	0.17	-0.8
6,524,322	+		PFLU_RS29365	0.17	-0.6
6,524,322	+		PFLU_RS29365	0.17	+0.4
6,524,322	+		PFLU_RS29365	0.17	-1.4
6,524,322	+		PFLU_RS29365	0.17	+1.2
6,524,322	+		PFLU_RS29365	0.17	-1.4
6,524,322	+		PFLU_RS29365	0.17	-0.2
6,524,322	+		PFLU_RS29365	0.17	+0.1
6,524,322	+		PFLU_RS29365	0.17	-1.5
6,524,322	+		PFLU_RS29365	0.17	-1.4
6,524,322	+		PFLU_RS29365	0.17	-0.9
6,524,322	+		PFLU_RS29365	0.17	-2.0
6,524,322	+		PFLU_RS29365	0.17	-2.1
6,524,322	+		PFLU_RS29365	0.17	+1.6
6,524,322	+		PFLU_RS29365	0.17	-1.5
6,524,322	+		PFLU_RS29365	0.17	-2.1
6,524,322	+		PFLU_RS29365	0.17	+0.1
6,524,322	+		PFLU_RS29365	0.17	-0.1
6,524,323	-		PFLU_RS29365	0.17	-1.5
6,524,323	-		PFLU_RS29365	0.17	-0.7
6,524,323	-		PFLU_RS29365	0.17	+0.8
6,524,323	-		PFLU_RS29365	0.17	+1.5
6,524,323	-		PFLU_RS29365	0.17	-1.2
6,524,323	-		PFLU_RS29365	0.17	+1.8
6,524,323	-		PFLU_RS29365	0.17	+0.4
6,524,323	-		PFLU_RS29365	0.17	+1.3
6,524,323	-		PFLU_RS29365	0.17	+2.9
6,524,323	-		PFLU_RS29365	0.17	-2.7
6,524,323	-		PFLU_RS29365	0.17	-1.6
6,524,323	-		PFLU_RS29365	0.17	-1.0
6,524,323	-		PFLU_RS29365	0.17	-2.3
6,524,323	-		PFLU_RS29365	0.17	+2.4
6,524,323	-		PFLU_RS29365	0.17	+0.1
6,524,323	-		PFLU_RS29365	0.17	-2.2
6,524,323	-		PFLU_RS29365	0.17	+1.1
6,524,323	-		PFLU_RS29365	0.17	+0.3
6,524,323	-		PFLU_RS29365	0.17	+0.4
6,524,323	-		PFLU_RS29365	0.17	-0.2
6,524,323	-		PFLU_RS29365	0.17	+0.5
6,524,323	-		PFLU_RS29365	0.17	+2.0
6,524,323	-		PFLU_RS29365	0.17	+0.4
6,524,323	-		PFLU_RS29365	0.17	-0.2
6,524,323	-		PFLU_RS29365	0.17	-0.8
6,524,323	-		PFLU_RS29365	0.17	+1.2
6,524,326	+		PFLU_RS29365	0.17	-0.9
6,524,327	-		PFLU_RS29365	0.17	+0.2
6,524,327	-		PFLU_RS29365	0.17	-0.8
6,524,327	-		PFLU_RS29365	0.17	-1.2
6,524,327	-		PFLU_RS29365	0.17	-1.2
6,524,327	-		PFLU_RS29365	0.17	+2.4
6,524,327	-		PFLU_RS29365	0.17	-0.4
6,524,327	-		PFLU_RS29365	0.17	-1.8
6,524,451	+		PFLU_RS29365	0.40	+1.1
6,524,451	+		PFLU_RS29365	0.40	-2.1
6,524,451	+		PFLU_RS29365	0.40	+1.8
6,524,452	-		PFLU_RS29365	0.40	-0.9
6,524,452	-		PFLU_RS29365	0.40	+1.0
6,524,452	-		PFLU_RS29365	0.40	+0.6
6,524,452	-		PFLU_RS29365	0.40	-1.8
6,524,452	-		PFLU_RS29365	0.40	-1.2
6,524,452	-		PFLU_RS29365	0.40	+2.0
6,524,452	-		PFLU_RS29365	0.40	+1.2
6,524,499	-		PFLU_RS29365	0.49	-1.6
6,524,499	-		PFLU_RS29365	0.49	+0.4
6,524,530	+		PFLU_RS29365	0.54	-1.9
6,524,551	+		PFLU_RS29365	0.58	+4.4
6,524,551	+		PFLU_RS29365	0.58	-3.3
6,524,551	+		PFLU_RS29365	0.58	-1.6
6,524,551	+		PFLU_RS29365	0.58	-0.6
6,524,551	+		PFLU_RS29365	0.58	+2.1
6,524,551	+		PFLU_RS29365	0.58	+1.1
6,524,552	-		PFLU_RS29365	0.58	+1.3
6,524,552	-		PFLU_RS29365	0.58	-2.2
6,524,552	-		PFLU_RS29365	0.58	+2.4
6,524,552	-		PFLU_RS29365	0.58	+0.4
6,524,552	-		PFLU_RS29365	0.58	+1.1
6,524,553	+		PFLU_RS29365	0.59	-2.2
6,524,553	+		PFLU_RS29365	0.59	+0.4
6,524,553	+		PFLU_RS29365	0.59	-0.2
6,524,553	+		PFLU_RS29365	0.59	+1.2
6,524,554	-		PFLU_RS29365	0.59	-0.8
6,524,554	-		PFLU_RS29365	0.59	+1.9
6,524,554	-		PFLU_RS29365	0.59	+1.6
6,524,570	+		PFLU_RS29365	0.62	-0.6
6,524,570	+		PFLU_RS29365	0.62	+0.6
6,524,571	-		PFLU_RS29365	0.62	-2.0
6,524,571	-		PFLU_RS29365	0.62	-0.4
6,524,746	+				-2.3
6,524,746	+				+0.3
6,524,747	-				-0.4
6,524,747	-				+0.4
6,524,793	+				+1.3
6,524,793	+				-2.1
6,524,793	+				+0.6
6,524,793	+				+0.9
6,524,794	-				-0.0
6,524,794	-				+1.1
6,524,812	+				-0.3
6,524,812	+				-0.8
6,524,812	+				-2.6
6,524,812	+				-1.3
6,524,812	+				+0.6
6,524,812	+				+1.4
6,524,813	-				-0.6
6,524,813	-				-0.8
6,524,813	-				-0.7
6,524,813	-				+0.2
6,524,813	-				+2.3
6,524,813	-				-3.3
6,524,824	-				-2.4
6,524,844	+				+0.4
6,524,844	+				+0.8
6,524,844	+				+2.0
6,524,845	-				-2.3
6,524,845	-				-0.4
6,524,845	-				-1.0
6,524,848	+				-2.1
6,524,848	+				-0.2
6,524,848	+				+1.0
6,524,848	+				-1.3
6,524,848	+				-0.6
6,524,848	+				-0.8
6,524,848	+				-0.3
6,524,848	+				+0.9
6,524,849	-				+0.1
6,524,849	-				+1.4
6,524,849	-				-0.0
6,524,863	+				-1.4
6,524,864	-				-1.8
6,524,864	-				-2.0
6,524,886	+				-0.1
6,524,886	+				-2.4
6,524,887	-				-1.1
6,524,887	-				+0.4
6,524,909	+				+0.3
6,524,909	+				-0.9
6,524,909	+				-0.9
6,524,910	-				-2.1
6,525,983	+				+0.1
6,525,983	+				-0.4
6,525,983	+				-0.4
6,525,983	+				+0.4
6,525,983	+				-1.7
6,525,983	+				+0.1
6,525,984	-				-2.5
6,525,984	-				-2.4
6,525,984	-				-1.6
6,526,080	+				+0.4
6,526,080	+				-0.2
6,526,081	-				-0.1
6,526,081	-				+0.2
6,526,204	+		PFLU_RS29375	0.44	+1.3
6,526,204	+		PFLU_RS29375	0.44	-1.2
6,526,204	+		PFLU_RS29375	0.44	-0.3
6,526,336	+		PFLU_RS29375	0.81	+0.8
6,526,336	+		PFLU_RS29375	0.81	+1.1
6,526,336	+		PFLU_RS29375	0.81	-2.3
6,526,336	+		PFLU_RS29375	0.81	-1.8
6,526,336	+		PFLU_RS29375	0.81	+1.1
6,526,337	-		PFLU_RS29375	0.81	+0.3
6,526,337	-		PFLU_RS29375	0.81	-1.4
6,526,337	-		PFLU_RS29375	0.81	-0.0
6,526,337	-		PFLU_RS29375	0.81	-0.3
6,526,337	-		PFLU_RS29375	0.81	-1.3
6,526,337	-		PFLU_RS29375	0.81	+1.2
6,526,337	-		PFLU_RS29375	0.81	-0.4
6,526,440	+				+1.9
6,526,440	+				-2.4
6,526,440	+				+0.1
6,526,440	+				-0.1
6,526,659	-		PFLU_RS29380	0.22	+1.0
6,526,784	+		PFLU_RS29380	0.31	+1.3
6,526,784	+		PFLU_RS29380	0.31	+0.7
6,526,784	+		PFLU_RS29380	0.31	-2.0
6,526,784	+		PFLU_RS29380	0.31	-1.7
6,526,784	+		PFLU_RS29380	0.31	-0.1
6,526,784	+		PFLU_RS29380	0.31	-1.2
6,526,784	+		PFLU_RS29380	0.31	+0.3
6,526,784	+		PFLU_RS29380	0.31	+0.2
6,526,784	+		PFLU_RS29380	0.31	-0.1
6,526,784	+		PFLU_RS29380	0.31	-1.4
6,526,784	+		PFLU_RS29380	0.31	+2.2
6,526,784	+		PFLU_RS29380	0.31	-0.4
6,526,785	-		PFLU_RS29380	0.31	-2.1
6,526,785	-		PFLU_RS29380	0.31	-0.6
6,526,785	-		PFLU_RS29380	0.31	-1.0
6,526,785	-		PFLU_RS29380	0.31	+0.7
6,526,785	-		PFLU_RS29380	0.31	+0.8
6,526,785	-		PFLU_RS29380	0.31	-1.7
6,526,785	-		PFLU_RS29380	0.31	+1.3
6,526,785	-		PFLU_RS29380	0.31	-1.6
6,526,785	-		PFLU_RS29380	0.31	-1.6
6,526,785	-		PFLU_RS29380	0.31	-1.3
6,526,785	-		PFLU_RS29380	0.31	+0.8
6,526,785	-		PFLU_RS29380	0.31	-0.1
6,526,785	-		PFLU_RS29380	0.31	-2.8
6,526,785	-		PFLU_RS29380	0.31	-0.8
6,526,785	-		PFLU_RS29380	0.31	-1.6
6,526,785	-		PFLU_RS29380	0.31	-0.6
6,526,785	-		PFLU_RS29380	0.31	-2.1
6,526,785	-		PFLU_RS29380	0.31	+0.6
6,526,785	-		PFLU_RS29380	0.31	+0.7
6,526,785	-		PFLU_RS29380	0.31	-2.1
6,526,851	-		PFLU_RS29380	0.37	-1.0
6,526,865	+		PFLU_RS29380	0.38	-1.2
6,526,866	-		PFLU_RS29380	0.38	-1.3
6,526,866	-		PFLU_RS29380	0.38	-1.1
6,526,866	-		PFLU_RS29380	0.38	-2.9
6,526,867	+		PFLU_RS29380	0.38	-1.1
6,526,868	-		PFLU_RS29380	0.38	-0.1
6,526,868	-		PFLU_RS29380	0.38	+0.8
6,526,910	+		PFLU_RS29380	0.41	-1.1
6,526,910	+		PFLU_RS29380	0.41	-2.2
6,526,911	-		PFLU_RS29380	0.41	-1.3
6,526,911	-		PFLU_RS29380	0.41	-2.1
6,526,927	+		PFLU_RS29380	0.42	+1.9
6,526,927	+		PFLU_RS29380	0.42	-0.8
6,526,927	+		PFLU_RS29380	0.42	-0.6
6,526,927	+		PFLU_RS29380	0.42	-2.0
6,526,927	+		PFLU_RS29380	0.42	+0.7
6,526,927	+		PFLU_RS29380	0.42	-0.4
6,526,927	+		PFLU_RS29380	0.42	-1.2
6,526,927	+		PFLU_RS29380	0.42	+0.8
6,526,927	+		PFLU_RS29380	0.42	-0.2
6,526,928	-		PFLU_RS29380	0.42	-0.9
6,526,928	-		PFLU_RS29380	0.42	-1.2
6,526,928	-		PFLU_RS29380	0.42	+0.0
6,526,928	-		PFLU_RS29380	0.42	-2.0
6,526,928	-		PFLU_RS29380	0.42	-0.8
6,526,928	-		PFLU_RS29380	0.42	-2.1
6,526,928	-		PFLU_RS29380	0.42	-0.6
6,526,931	+		PFLU_RS29380	0.43	+3.0
6,526,931	+		PFLU_RS29380	0.43	-1.3
6,526,932	-		PFLU_RS29380	0.43	-0.1
6,526,932	-		PFLU_RS29380	0.43	-0.3