Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28495

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
6,338,505	+		PFLU_RS28490	0.50	+1.9
6,338,505	+		PFLU_RS28490	0.50	-1.2
6,338,505	+		PFLU_RS28490	0.50	-0.2
6,338,505	+		PFLU_RS28490	0.50	-0.6
6,338,505	+		PFLU_RS28490	0.50	-2.9
6,338,506	-		PFLU_RS28490	0.50	+1.4
6,338,506	-		PFLU_RS28490	0.50	-1.5
6,338,506	-		PFLU_RS28490	0.50	+0.9
6,338,506	-		PFLU_RS28490	0.50	+2.4
6,338,506	-		PFLU_RS28490	0.50	+0.2
6,338,506	-		PFLU_RS28490	0.50	+1.1
6,338,530	+		PFLU_RS28490	0.51	-0.4
6,338,530	+		PFLU_RS28490	0.51	+3.2
6,338,530	+		PFLU_RS28490	0.51	+0.2
6,338,530	+		PFLU_RS28490	0.51	+0.3
6,338,530	+		PFLU_RS28490	0.51	-1.3
6,338,530	+		PFLU_RS28490	0.51	+0.4
6,338,530	+		PFLU_RS28490	0.51	-3.5
6,338,530	+		PFLU_RS28490	0.51	-0.6
6,338,530	+		PFLU_RS28490	0.51	+1.6
6,338,530	+		PFLU_RS28490	0.51	+1.6
6,338,530	+		PFLU_RS28490	0.51	-0.8
6,338,530	+		PFLU_RS28490	0.51	+1.7
6,338,530	+		PFLU_RS28490	0.51	+1.4
6,338,531	-		PFLU_RS28490	0.51	-1.4
6,338,531	-		PFLU_RS28490	0.51	-0.1
6,338,531	-		PFLU_RS28490	0.51	-1.2
6,338,531	-		PFLU_RS28490	0.51	+3.0
6,338,531	-		PFLU_RS28490	0.51	-1.9
6,338,531	-		PFLU_RS28490	0.51	-0.2
6,338,531	-		PFLU_RS28490	0.51	+0.7
6,338,582	+		PFLU_RS28490	0.55	+0.3
6,338,582	+		PFLU_RS28490	0.55	-0.8
6,338,582	+		PFLU_RS28490	0.55	-2.0
6,338,583	-		PFLU_RS28490	0.55	-1.2
6,338,583	-		PFLU_RS28490	0.55	-1.6
6,338,583	-		PFLU_RS28490	0.55	+1.2
6,338,583	-		PFLU_RS28490	0.55	-0.8
6,338,583	-		PFLU_RS28490	0.55	-1.4
6,338,583	-		PFLU_RS28490	0.55	+0.3
6,338,583	-		PFLU_RS28490	0.55	-2.7
6,338,583	-		PFLU_RS28490	0.55	+1.6
6,338,583	-		PFLU_RS28490	0.55	-1.3
6,338,583	-		PFLU_RS28490	0.55	-0.0
6,338,583	-		PFLU_RS28490	0.55	-1.9
6,338,583	-		PFLU_RS28490	0.55	+1.4
6,338,627	+		PFLU_RS28490	0.58	+2.9
6,338,627	+		PFLU_RS28490	0.58	-1.5
6,338,627	+		PFLU_RS28490	0.58	+2.8
6,338,627	+		PFLU_RS28490	0.58	-1.3
6,338,628	-		PFLU_RS28490	0.58	-2.3
6,338,628	-		PFLU_RS28490	0.58	+1.3
6,338,628	-		PFLU_RS28490	0.58	+1.5
6,338,678	+		PFLU_RS28490	0.62	-0.3
6,338,679	-		PFLU_RS28490	0.62	+1.6
6,338,679	-		PFLU_RS28490	0.62	-0.4
6,338,723	+		PFLU_RS28490	0.65	+0.8
6,338,723	+		PFLU_RS28490	0.65	-2.4
6,338,723	+		PFLU_RS28490	0.65	-2.3
6,338,723	+		PFLU_RS28490	0.65	+1.9
6,338,723	+		PFLU_RS28490	0.65	+0.8
6,338,723	+		PFLU_RS28490	0.65	+1.9
6,338,723	+		PFLU_RS28490	0.65	+0.1
6,338,723	+		PFLU_RS28490	0.65	-2.3
6,338,723	+		PFLU_RS28490	0.65	-2.9
6,338,723	+		PFLU_RS28490	0.65	+0.1
6,338,723	+		PFLU_RS28490	0.65	+0.9
6,338,723	+		PFLU_RS28490	0.65	-1.7
6,338,724	-		PFLU_RS28490	0.65	+0.9
6,338,724	-		PFLU_RS28490	0.65	+0.9
6,338,724	-		PFLU_RS28490	0.65	-0.8
6,338,724	-		PFLU_RS28490	0.65	-0.1
6,338,769	-		PFLU_RS28490	0.68	+1.8
6,338,769	-		PFLU_RS28490	0.68	+1.1
6,338,769	-		PFLU_RS28490	0.68	+0.7
6,338,879	+		PFLU_RS28490	0.76	+2.0
6,338,906	+		PFLU_RS28490	0.78	+0.9
6,338,906	+		PFLU_RS28490	0.78	+0.2
6,338,906	+		PFLU_RS28490	0.78	+0.5
6,338,906	+		PFLU_RS28490	0.78	+0.0
6,338,906	+		PFLU_RS28490	0.78	+4.8
6,338,906	+		PFLU_RS28490	0.78	-1.4
6,338,906	+		PFLU_RS28490	0.78	-0.8
6,338,907	-		PFLU_RS28490	0.78	+1.3
6,338,907	-		PFLU_RS28490	0.78	+0.4
6,338,907	-		PFLU_RS28490	0.78	+2.5
6,338,907	-		PFLU_RS28490	0.78	+0.4
6,338,907	-		PFLU_RS28490	0.78	+0.4
6,338,907	-		PFLU_RS28490	0.78	+0.8
6,338,939	+		PFLU_RS28490	0.80	-1.8
6,338,939	+		PFLU_RS28490	0.80	+2.4
6,338,939	+		PFLU_RS28490	0.80	-1.8
6,338,939	+		PFLU_RS28490	0.80	+0.9
6,338,939	+		PFLU_RS28490	0.80	-1.2
6,338,940	-		PFLU_RS28490	0.80	+1.1
6,338,940	-		PFLU_RS28490	0.80	-2.2
6,338,940	-		PFLU_RS28490	0.80	-1.6
6,338,940	-		PFLU_RS28490	0.80	-0.4
6,338,942	+		PFLU_RS28490	0.80	-2.0
6,338,943	-		PFLU_RS28490	0.80	-0.4
6,338,943	-		PFLU_RS28490	0.80	+1.3
6,338,943	-		PFLU_RS28490	0.80	+2.7
6,338,943	-		PFLU_RS28490	0.80	+0.1
6,338,943	-		PFLU_RS28490	0.80	+0.1
6,338,943	-		PFLU_RS28490	0.80	-0.4
6,338,943	-		PFLU_RS28490	0.80	+0.1
6,338,943	-		PFLU_RS28490	0.80	+0.6
6,338,943	-		PFLU_RS28490	0.80	+0.0
6,338,943	-		PFLU_RS28490	0.80	+0.4
6,338,951	+		PFLU_RS28490	0.81	+1.7
6,338,952	-		PFLU_RS28490	0.81	+1.4
6,338,977	-		PFLU_RS28490	0.83	+0.3
6,339,044	-		PFLU_RS28490	0.87	+0.1
6,339,044	-		PFLU_RS28490	0.87	-1.4
6,339,167	+				-1.7
6,339,167	+				-0.9
6,339,167	+				+0.6
6,339,167	+				+0.4
6,339,168	-				-0.6
6,339,247	+				-2.1
6,339,247	+				-2.1
6,339,247	+				+2.0
6,339,247	+				-1.1
6,339,247	+				+1.0
6,339,248	-				+0.4
6,339,248	-				+0.1
6,339,248	-				+2.3
6,339,248	-				-1.1
6,339,260	+				+0.1
6,339,261	-				-0.8
6,339,261	-				-0.9
6,339,503	+		PFLU_RS28495	0.46	-1.9
6,339,503	+		PFLU_RS28495	0.46	+1.5
6,339,574	+		PFLU_RS28495	0.59	-0.8
6,339,574	+		PFLU_RS28495	0.59	-1.5
6,339,574	+		PFLU_RS28495	0.59	-2.1
6,339,574	+		PFLU_RS28495	0.59	-1.7
6,339,574	+		PFLU_RS28495	0.59	-1.4
6,339,574	+		PFLU_RS28495	0.59	-1.2
6,339,574	+		PFLU_RS28495	0.59	+0.0
6,339,574	+		PFLU_RS28495	0.59	-2.2
6,339,575	-		PFLU_RS28495	0.59	+1.3
6,339,575	-		PFLU_RS28495	0.59	-0.4
6,339,575	-		PFLU_RS28495	0.59	-1.7
6,339,575	-		PFLU_RS28495	0.59	-0.1
6,339,575	-		PFLU_RS28495	0.59	-3.2
6,339,575	-		PFLU_RS28495	0.59	-0.1
6,339,575	-		PFLU_RS28495	0.59	+0.4
6,339,575	-		PFLU_RS28495	0.59	-0.6
6,339,575	-		PFLU_RS28495	0.59	-2.3
6,339,575	-		PFLU_RS28495	0.59	-0.3
6,339,681	+		PFLU_RS28495	0.79	-0.3
6,339,681	+		PFLU_RS28495	0.79	-1.5
6,339,681	+		PFLU_RS28495	0.79	+0.6
6,339,682	-		PFLU_RS28495	0.79	+1.1
6,339,682	-		PFLU_RS28495	0.79	-2.8
6,339,682	-		PFLU_RS28495	0.79	+1.7
6,339,682	-		PFLU_RS28495	0.79	-1.0
6,339,682	-		PFLU_RS28495	0.79	+0.2
6,339,682	-		PFLU_RS28495	0.79	-1.2
6,339,682	-		PFLU_RS28495	0.79	-3.6
6,339,682	-		PFLU_RS28495	0.79	+0.0
6,339,682	-		PFLU_RS28495	0.79	+0.5
6,339,741	+		PFLU_RS28495	0.90	-1.9
6,339,741	+		PFLU_RS28495	0.90	+0.1
6,339,741	+		PFLU_RS28495	0.90	-0.4
6,339,741	+		PFLU_RS28495	0.90	-0.1
6,339,741	+		PFLU_RS28495	0.90	-0.6
6,339,741	+		PFLU_RS28495	0.90	-1.3
6,339,742	-		PFLU_RS28495	0.90	+0.4
6,339,742	-		PFLU_RS28495	0.90	-1.6
6,339,742	-		PFLU_RS28495	0.90	+0.2
6,339,795	+				+0.8
6,339,795	+				-0.2
6,339,795	+				+2.9
6,339,795	+				+0.3
6,339,795	+				-0.7
6,339,795	+				-1.8
6,339,795	+				+0.4
6,339,795	+				-0.4
6,339,796	-				+0.3
6,339,796	-				+1.3
6,339,796	-				+1.6
6,339,857	+				+0.9
6,339,858	-				-1.2
6,339,865	+				-0.6
6,339,865	+				+1.6
6,339,866	-				+1.7
6,339,866	-				-0.6
6,339,879	+				-1.7
6,339,879	+				-0.8
6,339,879	+				-0.1
6,339,880	-				+0.4
6,339,880	-				-1.4
6,339,880	-				+0.1
6,339,880	-				-0.7
6,339,887	+				-2.5
6,339,888	-				-0.1
6,339,888	-				-1.3
6,340,040	-		PFLU_RS28500	0.10	-1.2
6,340,111	+		PFLU_RS28500	0.14	-1.6
6,340,111	+		PFLU_RS28500	0.14	-1.4
6,340,112	-		PFLU_RS28500	0.15	+1.0
6,340,112	-		PFLU_RS28500	0.15	-2.4
6,340,112	-		PFLU_RS28500	0.15	-0.3
6,340,112	-		PFLU_RS28500	0.15	-2.7
6,340,112	-		PFLU_RS28500	0.15	-2.2
6,340,112	-		PFLU_RS28500	0.15	+0.1
6,340,124	-		PFLU_RS28500	0.15	+1.8
6,340,228	-		PFLU_RS28500	0.22	-0.5
6,340,264	+		PFLU_RS28500	0.24	+1.8
6,340,264	+		PFLU_RS28500	0.24	-0.6
6,340,402	+		PFLU_RS28500	0.33	+2.0
6,340,402	+		PFLU_RS28500	0.33	+1.4
6,340,453	+		PFLU_RS28500	0.36	+1.1
6,340,543	+		PFLU_RS28500	0.42	-2.5
6,340,543	+		PFLU_RS28500	0.42	-1.3
6,340,543	+		PFLU_RS28500	0.42	-0.8
6,340,543	+		PFLU_RS28500	0.42	+0.6
6,340,543	+		PFLU_RS28500	0.42	-1.4
6,340,544	-		PFLU_RS28500	0.42	+1.1
6,340,544	-		PFLU_RS28500	0.42	+0.9
6,340,570	+		PFLU_RS28500	0.43	-0.3
6,340,570	+		PFLU_RS28500	0.43	+0.1
6,340,570	+		PFLU_RS28500	0.43	+1.4
6,340,570	+		PFLU_RS28500	0.43	-1.9
6,340,570	+		PFLU_RS28500	0.43	-1.8
6,340,571	-		PFLU_RS28500	0.43	-0.4
6,340,571	-		PFLU_RS28500	0.43	-3.0
6,340,571	-		PFLU_RS28500	0.43	-1.9
6,340,666	+		PFLU_RS28500	0.49	-2.3
6,340,666	+		PFLU_RS28500	0.49	-0.4
6,340,666	+		PFLU_RS28500	0.49	-3.1
6,340,666	+		PFLU_RS28500	0.49	+1.1
6,340,666	+		PFLU_RS28500	0.49	-1.8
6,340,667	-		PFLU_RS28500	0.49	-1.8
6,340,667	-		PFLU_RS28500	0.49	-1.7
6,340,667	-		PFLU_RS28500	0.49	-1.1
6,340,667	-		PFLU_RS28500	0.49	-1.9
6,340,667	-		PFLU_RS28500	0.49	-1.5
6,340,667	-		PFLU_RS28500	0.49	-0.4
6,340,667	-		PFLU_RS28500	0.49	-0.8
6,340,667	-		PFLU_RS28500	0.49	-0.0
6,340,667	-		PFLU_RS28500	0.49	-2.5
6,340,667	-		PFLU_RS28500	0.49	+0.0
6,340,667	-		PFLU_RS28500	0.49	+0.2
6,340,667	-		PFLU_RS28500	0.49	+0.2
6,340,667	-		PFLU_RS28500	0.49	+0.7
6,340,667	-		PFLU_RS28500	0.49	+1.7