Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12930

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
2,918,115	+				-0.9
2,918,115	+				+3.1
2,918,115	+				-0.3
2,918,115	+				+0.5
2,918,116	-				+0.5
2,918,145	+				+1.7
2,918,146	-				-2.1
2,918,146	-				-0.3
2,918,950	+				-1.8
2,919,055	+				+1.4
2,919,056	-				-2.0
2,919,056	-				+0.9
2,919,056	-				+0.6
2,919,069	+				-2.0
2,919,070	-				-0.4
2,919,096	+				-1.3
2,919,096	+				-0.2
2,919,096	+				-0.7
2,919,096	+				-0.3
2,919,096	+				-1.9
2,919,096	+				+1.1
2,919,097	-				+1.4
2,919,097	-				-0.8
2,919,097	-				+0.7
2,919,097	-				-1.9
2,919,097	-				-0.6
2,919,097	-				+2.0
2,919,097	-				-1.8
2,919,209	+				+1.1
2,919,210	-				-0.4
2,919,229	-				+0.1
2,919,308	+				-3.1
2,919,309	-				+1.4
2,919,437	+		PFLU_RS12930	0.15	-0.3
2,919,459	+		PFLU_RS12930	0.16	-0.9
2,919,459	+		PFLU_RS12930	0.16	+0.7
2,919,459	+		PFLU_RS12930	0.16	+2.0
2,919,459	+		PFLU_RS12930	0.16	+0.7
2,919,459	+		PFLU_RS12930	0.16	-0.4
2,919,460	-		PFLU_RS12930	0.16	+1.2
2,919,460	-		PFLU_RS12930	0.16	-0.0
2,919,519	+		PFLU_RS12930	0.19	-1.3
2,919,519	+		PFLU_RS12930	0.19	+0.1
2,919,519	+		PFLU_RS12930	0.19	+0.1
2,919,519	+		PFLU_RS12930	0.19	-1.2
2,919,519	+		PFLU_RS12930	0.19	-2.6
2,919,520	-		PFLU_RS12930	0.19	+1.9
2,919,520	-		PFLU_RS12930	0.19	-2.1
2,919,520	-		PFLU_RS12930	0.19	+0.4
2,919,520	-		PFLU_RS12930	0.19	+1.5
2,919,520	-		PFLU_RS12930	0.19	-2.5
2,919,520	-		PFLU_RS12930	0.19	-0.0
2,919,582	+		PFLU_RS12930	0.22	+1.3
2,919,582	+		PFLU_RS12930	0.22	+1.1
2,919,582	+		PFLU_RS12930	0.22	+0.1
2,919,582	+		PFLU_RS12930	0.22	-0.5
2,919,582	+		PFLU_RS12930	0.22	+0.3
2,919,583	-		PFLU_RS12930	0.22	+0.0
2,919,583	-		PFLU_RS12930	0.22	+1.0
2,919,583	-		PFLU_RS12930	0.22	-0.3
2,919,583	-		PFLU_RS12930	0.22	-1.8
2,919,583	-		PFLU_RS12930	0.22	-0.0
2,919,583	-		PFLU_RS12930	0.22	+0.9
2,919,671	+		PFLU_RS12930	0.26	+1.3
2,919,688	+		PFLU_RS12930	0.26	+1.3
2,919,688	+		PFLU_RS12930	0.26	+2.0
2,919,689	-		PFLU_RS12930	0.26	-2.0
2,919,689	-		PFLU_RS12930	0.26	+1.7
2,919,930	+		PFLU_RS12930	0.37	+0.6
2,919,930	+		PFLU_RS12930	0.37	-1.0
2,919,930	+		PFLU_RS12930	0.37	+1.7
2,919,930	+		PFLU_RS12930	0.37	-3.1
2,919,930	+		PFLU_RS12930	0.37	+3.8
2,919,930	+		PFLU_RS12930	0.37	+2.1
2,919,930	+		PFLU_RS12930	0.37	+1.0
2,919,931	-		PFLU_RS12930	0.37	+0.7
2,919,931	-		PFLU_RS12930	0.37	-1.5
2,919,931	-		PFLU_RS12930	0.37	+1.7
2,919,931	-		PFLU_RS12930	0.37	-2.0
2,919,931	-		PFLU_RS12930	0.37	-1.3
2,919,931	-		PFLU_RS12930	0.37	-2.0
2,919,931	-		PFLU_RS12930	0.37	-0.7
2,920,083	+		PFLU_RS12930	0.44	+0.6
2,920,083	+		PFLU_RS12930	0.44	+0.5
2,920,083	+		PFLU_RS12930	0.44	-0.6
2,920,084	-		PFLU_RS12930	0.44	+3.4
2,920,084	-		PFLU_RS12930	0.44	+0.1
2,920,084	-		PFLU_RS12930	0.44	+4.5
2,920,099	-		PFLU_RS12930	0.45	+3.3
2,920,099	-		PFLU_RS12930	0.45	-1.3
2,920,099	-		PFLU_RS12930	0.45	+0.7
2,920,099	-		PFLU_RS12930	0.45	-1.6
2,920,099	-		PFLU_RS12930	0.45	+0.5
2,920,099	-		PFLU_RS12930	0.45	+2.0
2,920,099	-		PFLU_RS12930	0.45	+0.7
2,920,099	-		PFLU_RS12930	0.45	+1.4
2,920,099	-		PFLU_RS12930	0.45	-1.9
2,920,168	-		PFLU_RS12930	0.48	-1.0
2,920,168	-		PFLU_RS12930	0.48	+4.0
2,920,268	+		PFLU_RS12930	0.52	-1.1
2,920,370	+		PFLU_RS12930	0.57	+1.2
2,920,370	+		PFLU_RS12930	0.57	-0.3
2,920,370	+		PFLU_RS12930	0.57	-1.5
2,920,370	+		PFLU_RS12930	0.57	-2.3
2,920,370	+		PFLU_RS12930	0.57	+1.2
2,920,371	-		PFLU_RS12930	0.57	-3.3
2,920,371	-		PFLU_RS12930	0.57	-2.6
2,920,371	-		PFLU_RS12930	0.57	-0.6
2,920,371	-		PFLU_RS12930	0.57	+1.0
2,920,371	-		PFLU_RS12930	0.57	+0.6
2,920,371	-		PFLU_RS12930	0.57	+2.6
2,920,371	-		PFLU_RS12930	0.57	-2.2
2,920,371	-		PFLU_RS12930	0.57	-1.5
2,920,389	+		PFLU_RS12930	0.57	+1.1
2,920,389	+		PFLU_RS12930	0.57	-2.1
2,920,390	-		PFLU_RS12930	0.57	-1.5
2,920,390	-		PFLU_RS12930	0.57	+1.1
2,920,390	-		PFLU_RS12930	0.57	-0.9
2,920,390	-		PFLU_RS12930	0.57	+0.4
2,920,650	+		PFLU_RS12930	0.69	+1.9
2,920,650	+		PFLU_RS12930	0.69	+0.3
2,920,650	+		PFLU_RS12930	0.69	-0.3
2,920,650	+		PFLU_RS12930	0.69	-2.1
2,920,650	+		PFLU_RS12930	0.69	+0.7
2,920,650	+		PFLU_RS12930	0.69	+0.5
2,920,650	+		PFLU_RS12930	0.69	-1.2
2,920,651	-		PFLU_RS12930	0.69	-2.5
2,920,651	-		PFLU_RS12930	0.69	-1.6
2,920,651	-		PFLU_RS12930	0.69	+0.7
2,920,651	-		PFLU_RS12930	0.69	-0.3
2,920,651	-		PFLU_RS12930	0.69	+0.3
2,920,651	-		PFLU_RS12930	0.69	-1.5
2,920,651	-		PFLU_RS12930	0.69	+1.5
2,920,651	-		PFLU_RS12930	0.69	+0.3
2,920,651	-		PFLU_RS12930	0.69	+2.1
2,920,651	-		PFLU_RS12930	0.69	+1.1
2,920,651	-		PFLU_RS12930	0.69	-0.0
2,920,651	-		PFLU_RS12930	0.69	-1.6
2,920,651	-		PFLU_RS12930	0.69	-0.3
2,920,651	-		PFLU_RS12930	0.69	+2.7
2,920,651	-		PFLU_RS12930	0.69	+0.7
2,920,794	+		PFLU_RS12930	0.75	+2.7
2,920,794	+		PFLU_RS12930	0.75	+1.7
2,920,795	-		PFLU_RS12930	0.75	+0.6
2,920,795	-		PFLU_RS12930	0.75	-2.0
2,920,795	-		PFLU_RS12930	0.75	-0.2
2,920,795	-		PFLU_RS12930	0.75	-1.1
2,920,795	-		PFLU_RS12930	0.75	-0.4
2,920,795	-		PFLU_RS12930	0.75	-1.5
2,920,795	-		PFLU_RS12930	0.75	-1.0
2,920,795	-		PFLU_RS12930	0.75	+1.7
2,920,795	-		PFLU_RS12930	0.75	-2.2
2,920,823	+		PFLU_RS12930	0.77	-1.9
2,920,824	-		PFLU_RS12930	0.77	-0.3
2,920,826	+		PFLU_RS12930	0.77	+1.9
2,920,826	+		PFLU_RS12930	0.77	-0.9
2,920,826	+		PFLU_RS12930	0.77	-0.9
2,920,826	+		PFLU_RS12930	0.77	+1.7
2,920,826	+		PFLU_RS12930	0.77	+2.7
2,920,827	-		PFLU_RS12930	0.77	+0.4
2,920,827	-		PFLU_RS12930	0.77	-0.6
2,920,827	-		PFLU_RS12930	0.77	+1.0
2,920,844	+		PFLU_RS12930	0.78	-2.9
2,920,844	+		PFLU_RS12930	0.78	-2.3
2,920,844	+		PFLU_RS12930	0.78	-0.6
2,920,844	+		PFLU_RS12930	0.78	-0.3
2,920,844	+		PFLU_RS12930	0.78	-0.9
2,920,845	-		PFLU_RS12930	0.78	-1.3
2,920,845	-		PFLU_RS12930	0.78	-0.3
2,920,881	+		PFLU_RS12930	0.79	-1.4
2,920,882	-		PFLU_RS12930	0.79	-1.6
2,920,882	-		PFLU_RS12930	0.79	+1.5
2,920,882	-		PFLU_RS12930	0.79	-0.6
2,920,882	-		PFLU_RS12930	0.79	-0.2
2,920,882	-		PFLU_RS12930	0.79	+2.3
2,920,944	+		PFLU_RS12930	0.82	+1.4
2,920,985	+		PFLU_RS12930	0.84	+1.9
2,920,985	+		PFLU_RS12930	0.84	-0.9
2,920,985	+		PFLU_RS12930	0.84	-1.9
2,920,985	+		PFLU_RS12930	0.84	+1.7
2,920,985	+		PFLU_RS12930	0.84	-0.9
2,920,985	+		PFLU_RS12930	0.84	-2.4
2,920,985	+		PFLU_RS12930	0.84	-1.6
2,920,986	-		PFLU_RS12930	0.84	+0.6
2,920,986	-		PFLU_RS12930	0.84	+1.8
2,920,986	-		PFLU_RS12930	0.84	+1.7
2,920,986	-		PFLU_RS12930	0.84	+0.3
2,920,986	-		PFLU_RS12930	0.84	+0.4
2,920,986	-		PFLU_RS12930	0.84	-2.3
2,920,986	-		PFLU_RS12930	0.84	+1.7
2,921,021	+		PFLU_RS12930	0.85	-0.3
2,921,021	+		PFLU_RS12930	0.85	+0.1
2,921,031	+		PFLU_RS12930	0.86	-1.1
2,921,031	+		PFLU_RS12930	0.86	-1.8
2,921,031	+		PFLU_RS12930	0.86	-0.3
2,921,031	+		PFLU_RS12930	0.86	-1.5
2,921,031	+		PFLU_RS12930	0.86	+0.7
2,921,031	+		PFLU_RS12930	0.86	+0.7
2,921,031	+		PFLU_RS12930	0.86	-1.5
2,921,031	+		PFLU_RS12930	0.86	+1.1
2,921,031	+		PFLU_RS12930	0.86	+0.7
2,921,031	+		PFLU_RS12930	0.86	+0.7
2,921,031	+		PFLU_RS12930	0.86	-0.1
2,921,031	+		PFLU_RS12930	0.86	-1.3
2,921,031	+		PFLU_RS12930	0.86	-0.6
2,921,031	+		PFLU_RS12930	0.86	-2.3
2,921,031	+		PFLU_RS12930	0.86	-1.5
2,921,031	+		PFLU_RS12930	0.86	-2.1
2,921,031	+		PFLU_RS12930	0.86	+0.6
2,921,032	-		PFLU_RS12930	0.86	+0.5
2,921,032	-		PFLU_RS12930	0.86	+0.5
2,921,032	-		PFLU_RS12930	0.86	+1.1
2,921,032	-		PFLU_RS12930	0.86	-1.9
2,921,032	-		PFLU_RS12930	0.86	-0.4
2,921,032	-		PFLU_RS12930	0.86	-0.2
2,921,032	-		PFLU_RS12930	0.86	+0.7
2,921,032	-		PFLU_RS12930	0.86	+0.0
2,921,032	-		PFLU_RS12930	0.86	-2.6
2,921,032	-		PFLU_RS12930	0.86	+0.5
2,921,032	-		PFLU_RS12930	0.86	+0.4
2,921,032	-		PFLU_RS12930	0.86	+1.7
2,921,032	-		PFLU_RS12930	0.86	-0.9
2,921,032	-		PFLU_RS12930	0.86	-1.9
2,921,032	-		PFLU_RS12930	0.86	+2.1
2,921,033	+		PFLU_RS12930	0.86	+0.8
2,921,033	+		PFLU_RS12930	0.86	+0.4
2,921,033	+		PFLU_RS12930	0.86	+0.1
2,921,034	-		PFLU_RS12930	0.86	-0.0
2,921,034	-		PFLU_RS12930	0.86	-0.5
2,921,034	-		PFLU_RS12930	0.86	+1.7
2,921,034	-		PFLU_RS12930	0.86	-0.9
2,921,073	+		PFLU_RS12930	0.88	-0.6
2,921,074	-		PFLU_RS12930	0.88	+1.4
2,921,158	-				+1.0
2,921,168	+				-0.6
2,921,226	+				-0.6
2,921,226	+				-1.8
2,921,227	-				+1.4
2,921,227	-				-0.9
2,921,290	+				+1.1
2,921,291	-				-0.6
2,921,291	-				+1.7
2,921,291	-				-1.3
2,921,291	-				+1.7
2,921,291	-				+0.7
2,921,322	+				-1.5
2,921,322	+				+2.3
2,921,322	+				+0.1
2,921,322	+				-0.9
2,921,322	+				+0.7
2,921,322	+				-3.2
2,921,323	-				+0.4
2,921,323	-				+0.0
2,921,323	-				+0.1
2,921,323	-				-0.4
2,921,347	-				+0.1
2,921,356	+				+1.2
2,921,356	+				-1.9
2,921,357	-				+0.2
2,921,367	+				+1.7
2,921,368	-				-1.5
2,921,368	-				-0.3
2,921,368	-				+0.1
2,921,381	+				-2.1
2,921,397	+				-0.4
2,921,397	+				-1.9
2,921,398	-				+2.7
2,921,398	-				-2.2
2,921,398	-				-0.3
2,921,426	+		PFLU_RS12935	0.12	+1.0
2,921,426	+		PFLU_RS12935	0.12	+1.3
2,921,426	+		PFLU_RS12935	0.12	-0.3
2,921,426	+		PFLU_RS12935	0.12	-0.8
2,921,426	+		PFLU_RS12935	0.12	+0.7
2,921,426	+		PFLU_RS12935	0.12	-2.0
2,921,427	-		PFLU_RS12935	0.12	-1.8
2,921,427	-		PFLU_RS12935	0.12	-0.5
2,921,427	-		PFLU_RS12935	0.12	-1.3
2,921,427	-		PFLU_RS12935	0.12	+2.0
2,921,427	-		PFLU_RS12935	0.12	-1.8
2,921,465	+		PFLU_RS12935	0.19	-0.4
2,921,466	-		PFLU_RS12935	0.19	+1.4
2,921,466	-		PFLU_RS12935	0.19	+0.1
2,921,466	-		PFLU_RS12935	0.19	+0.4
2,921,537	+		PFLU_RS12935	0.31	+0.9
2,921,537	+		PFLU_RS12935	0.31	-0.6
2,921,537	+		PFLU_RS12935	0.31	+0.5
2,921,537	+		PFLU_RS12935	0.31	+0.1
2,921,538	-		PFLU_RS12935	0.31	-1.5
2,921,603	+		PFLU_RS12935	0.42	-0.7
2,921,603	+		PFLU_RS12935	0.42	+0.9
2,921,603	+		PFLU_RS12935	0.42	+0.7
2,921,604	-		PFLU_RS12935	0.42	+0.3
2,921,604	-		PFLU_RS12935	0.42	-0.9
2,921,813	+		PFLU_RS12935	0.78	+1.5
2,921,813	+		PFLU_RS12935	0.78	-2.4
2,921,813	+		PFLU_RS12935	0.78	+1.6
2,921,814	-		PFLU_RS12935	0.79	-0.3
2,921,936	+				+0.5
2,922,029	+		PFLU_RS12940	0.11	+1.7
2,922,030	-		PFLU_RS12940	0.11	+1.1
2,922,158	+		PFLU_RS12940	0.25	+1.8
2,922,158	+		PFLU_RS12940	0.25	-1.5
2,922,158	+		PFLU_RS12940	0.25	+1.7
2,922,158	+		PFLU_RS12940	0.25	+1.1
2,922,159	-		PFLU_RS12940	0.25	+1.9
2,922,159	-		PFLU_RS12940	0.25	-2.3
2,922,159	-		PFLU_RS12940	0.25	+0.1
2,922,159	-		PFLU_RS12940	0.25	+0.8
2,922,167	-		PFLU_RS12940	0.26	+0.5
2,922,167	-		PFLU_RS12940	0.26	+2.7
2,922,290	+		PFLU_RS12940	0.40	-2.2
2,922,290	+		PFLU_RS12940	0.40	-0.6
2,922,290	+		PFLU_RS12940	0.40	+0.2
2,922,290	+		PFLU_RS12940	0.40	-0.4
2,922,290	+		PFLU_RS12940	0.40	+3.4
2,922,290	+		PFLU_RS12940	0.40	+0.0
2,922,291	-		PFLU_RS12940	0.40	-0.5
2,922,291	-		PFLU_RS12940	0.40	+1.3
2,922,291	-		PFLU_RS12940	0.40	+0.7