Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05135

Experiment: Betaine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS; with chloride
1,144,038	+		PFLU_RS05130	0.30	-0.6
1,144,074	+		PFLU_RS05130	0.32	-1.5
1,144,075	-		PFLU_RS05130	0.33	+0.2
1,144,136	+		PFLU_RS05130	0.37	-2.7
1,144,136	+		PFLU_RS05130	0.37	+1.5
1,144,137	-		PFLU_RS05130	0.37	+1.2
1,144,137	-		PFLU_RS05130	0.37	+1.7
1,144,137	-		PFLU_RS05130	0.37	-0.5
1,144,230	+		PFLU_RS05130	0.45	-2.3
1,144,429	-		PFLU_RS05130	0.60	+1.1
1,144,590	+		PFLU_RS05130	0.73	+0.9
1,144,590	+		PFLU_RS05130	0.73	+0.7
1,144,590	+		PFLU_RS05130	0.73	+0.9
1,144,591	-		PFLU_RS05130	0.73	+0.1
1,144,591	-		PFLU_RS05130	0.73	+1.5
1,144,591	-		PFLU_RS05130	0.73	-1.7
1,144,591	-		PFLU_RS05130	0.73	+0.2
1,144,591	-		PFLU_RS05130	0.73	-0.1
1,144,591	-		PFLU_RS05130	0.73	-0.8
1,144,591	-		PFLU_RS05130	0.73	-1.9
1,144,623	+		PFLU_RS05130	0.75	-1.7
1,144,623	+		PFLU_RS05130	0.75	+0.8
1,144,623	+		PFLU_RS05130	0.75	+0.2
1,144,623	+		PFLU_RS05130	0.75	+1.2
1,144,623	+		PFLU_RS05130	0.75	+0.1
1,144,623	+		PFLU_RS05130	0.75	-0.3
1,144,623	+		PFLU_RS05130	0.75	-2.4
1,144,623	+		PFLU_RS05130	0.75	-1.7
1,144,624	-		PFLU_RS05130	0.75	-0.6
1,144,624	-		PFLU_RS05130	0.75	-0.5
1,144,624	-		PFLU_RS05130	0.75	-2.2
1,144,624	-		PFLU_RS05130	0.75	+1.5
1,144,927	+				-1.5
1,144,927	+				-1.2
1,144,927	+				+1.1
1,144,927	+				-0.6
1,144,927	+				+1.0
1,144,927	+				-2.2
1,144,927	+				-0.7
1,144,927	+				+0.2
1,144,927	+				-2.1
1,144,927	+				-1.2
1,144,927	+				+0.9
1,144,927	+				-2.2
1,144,927	+				+1.7
1,144,927	+				+1.9
1,144,927	+				-1.3
1,144,927	+				-1.9
1,144,927	+				-2.1
1,144,927	+				-0.9
1,144,927	+				-1.5
1,144,927	+				-1.5
1,144,927	+				+0.8
1,144,927	+				-0.6
1,144,927	+				+1.5
1,144,928	-				-0.7
1,144,928	-				+2.1
1,144,928	-				-0.9
1,144,928	-				+0.3
1,144,928	-				-0.5
1,144,928	-				+0.1
1,144,928	-				-1.2
1,144,928	-				+2.8
1,144,928	-				+1.7
1,144,928	-				-1.5
1,144,928	-				-0.3
1,144,928	-				+1.1
1,144,928	-				-0.1
1,144,928	-				+1.5
1,144,928	-				-0.3
1,144,931	+				-0.8
1,144,931	+				-0.8
1,144,931	+				+0.9
1,144,931	+				-2.1
1,144,931	+				-2.0
1,144,931	+				+0.7
1,144,931	+				+0.6
1,144,931	+				-0.1
1,144,931	+				-0.3
1,144,931	+				+1.2
1,144,931	+				-0.1
1,144,931	+				+0.0
1,144,931	+				+1.0
1,144,931	+				-0.8
1,144,931	+				-1.1
1,144,931	+				-1.1
1,144,931	+				+0.7
1,144,931	+				+0.7
1,144,931	+				+0.7
1,144,931	+				+0.4
1,144,931	+				+1.1
1,144,931	+				+0.6
1,144,931	+				-2.1
1,144,931	+				+2.4
1,144,932	-				+0.5
1,144,932	-				-1.1
1,144,932	-				+0.1
1,144,932	-				-1.3
1,144,932	-				-2.1
1,144,932	-				-1.7
1,144,932	-				-0.3
1,144,932	-				-2.0
1,144,932	-				+1.6
1,144,932	-				+0.1
1,144,932	-				-1.6
1,144,932	-				-1.9
1,144,932	-				+0.2
1,144,932	-				-1.9
1,144,932	-				-0.3
1,144,932	-				-0.7
1,144,932	-				+3.1
1,144,932	-				+1.9
1,144,932	-				-0.3
1,144,957	+				-0.3
1,144,960	+				+1.0
1,144,961	-				+0.7
1,144,961	-				-1.5
1,144,992	-				-2.3
1,145,054	+				-0.9
1,145,054	+				-2.0
1,145,054	+				+1.2
1,145,055	-				-1.1
1,145,055	-				+1.2
1,145,055	-				+3.2
1,145,055	-				-0.4
1,145,055	-				+1.2
1,145,200	+		PFLU_RS05135	0.14	-2.6
1,145,200	+		PFLU_RS05135	0.14	-3.3
1,145,201	-		PFLU_RS05135	0.14	-1.8
1,145,201	-		PFLU_RS05135	0.14	+2.2
1,145,201	-		PFLU_RS05135	0.14	-2.1
1,145,434	+		PFLU_RS05135	0.31	-1.6
1,145,434	+		PFLU_RS05135	0.31	-2.4
1,145,434	+		PFLU_RS05135	0.31	+0.2
1,145,434	+		PFLU_RS05135	0.31	-0.4
1,145,434	+		PFLU_RS05135	0.31	-0.8
1,145,435	-		PFLU_RS05135	0.31	+2.2
1,145,435	-		PFLU_RS05135	0.31	-2.5
1,145,435	-		PFLU_RS05135	0.31	-1.1
1,145,435	-		PFLU_RS05135	0.31	-0.8
1,145,471	+		PFLU_RS05135	0.34	-0.4
1,145,471	+		PFLU_RS05135	0.34	-1.9
1,145,471	+		PFLU_RS05135	0.34	-0.4
1,145,471	+		PFLU_RS05135	0.34	-2.8
1,145,471	+		PFLU_RS05135	0.34	-0.1
1,145,471	+		PFLU_RS05135	0.34	+0.2
1,145,471	+		PFLU_RS05135	0.34	-0.6
1,145,471	+		PFLU_RS05135	0.34	-1.9
1,145,471	+		PFLU_RS05135	0.34	-1.6
1,145,471	+		PFLU_RS05135	0.34	-1.7
1,145,471	+		PFLU_RS05135	0.34	+1.2
1,145,471	+		PFLU_RS05135	0.34	-2.5
1,145,471	+		PFLU_RS05135	0.34	-0.4
1,145,471	+		PFLU_RS05135	0.34	-1.4
1,145,471	+		PFLU_RS05135	0.34	-2.3
1,145,471	+		PFLU_RS05135	0.34	-1.5
1,145,471	+		PFLU_RS05135	0.34	-2.1
1,145,471	+		PFLU_RS05135	0.34	-2.7
1,145,471	+		PFLU_RS05135	0.34	-1.1
1,145,471	+		PFLU_RS05135	0.34	-0.8
1,145,471	+		PFLU_RS05135	0.34	-2.0
1,145,471	+		PFLU_RS05135	0.34	-1.2
1,145,471	+		PFLU_RS05135	0.34	+0.8
1,145,471	+		PFLU_RS05135	0.34	-1.4
1,145,471	+		PFLU_RS05135	0.34	-1.9
1,145,471	+		PFLU_RS05135	0.34	-0.6
1,145,472	-		PFLU_RS05135	0.34	-2.3
1,145,472	-		PFLU_RS05135	0.34	-1.4
1,145,472	-		PFLU_RS05135	0.34	-1.9
1,145,472	-		PFLU_RS05135	0.34	-2.2
1,145,472	-		PFLU_RS05135	0.34	-1.5
1,145,472	-		PFLU_RS05135	0.34	-2.4
1,145,472	-		PFLU_RS05135	0.34	-0.8
1,145,472	-		PFLU_RS05135	0.34	-1.8
1,145,472	-		PFLU_RS05135	0.34	-0.1
1,145,472	-		PFLU_RS05135	0.34	-0.9
1,145,472	-		PFLU_RS05135	0.34	-0.6
1,145,472	-		PFLU_RS05135	0.34	-2.4
1,145,472	-		PFLU_RS05135	0.34	-2.4
1,145,472	-		PFLU_RS05135	0.34	-2.5
1,145,472	-		PFLU_RS05135	0.34	+0.4
1,145,474	+		PFLU_RS05135	0.34	+1.0
1,145,474	+		PFLU_RS05135	0.34	-2.4
1,145,474	+		PFLU_RS05135	0.34	+0.6
1,145,474	+		PFLU_RS05135	0.34	+0.2
1,145,474	+		PFLU_RS05135	0.34	-1.9
1,145,474	+		PFLU_RS05135	0.34	-1.7
1,145,474	+		PFLU_RS05135	0.34	-0.9
1,145,474	+		PFLU_RS05135	0.34	-1.4
1,145,474	+		PFLU_RS05135	0.34	-0.6
1,145,474	+		PFLU_RS05135	0.34	-0.6
1,145,474	+		PFLU_RS05135	0.34	-2.1
1,145,475	-		PFLU_RS05135	0.34	-2.9
1,145,475	-		PFLU_RS05135	0.34	-1.4
1,145,475	-		PFLU_RS05135	0.34	-2.1
1,145,475	-		PFLU_RS05135	0.34	-2.2
1,145,475	-		PFLU_RS05135	0.34	-1.3
1,145,475	-		PFLU_RS05135	0.34	-0.4
1,145,475	-		PFLU_RS05135	0.34	-0.8
1,145,475	-		PFLU_RS05135	0.34	-1.5
1,145,475	-		PFLU_RS05135	0.34	+0.2
1,145,475	-		PFLU_RS05135	0.34	-1.8
1,145,475	-		PFLU_RS05135	0.34	+0.6
1,145,475	-		PFLU_RS05135	0.34	+0.6
1,145,475	-		PFLU_RS05135	0.34	-3.5
1,145,742	+		PFLU_RS05135	0.54	-2.7
1,145,742	+		PFLU_RS05135	0.54	+0.2
1,145,742	+		PFLU_RS05135	0.54	-0.6
1,145,742	+		PFLU_RS05135	0.54	-2.2
1,145,742	+		PFLU_RS05135	0.54	-1.4
1,145,743	-		PFLU_RS05135	0.54	-1.4
1,145,743	-		PFLU_RS05135	0.54	-2.0
1,145,743	-		PFLU_RS05135	0.54	-0.4
1,145,743	-		PFLU_RS05135	0.54	-1.6
1,145,743	-		PFLU_RS05135	0.54	-1.9
1,145,743	-		PFLU_RS05135	0.54	-0.9
1,145,743	-		PFLU_RS05135	0.54	-1.4
1,145,743	-		PFLU_RS05135	0.54	-2.1
1,145,743	-		PFLU_RS05135	0.54	-2.2
1,145,743	-		PFLU_RS05135	0.54	-0.1
1,145,743	-		PFLU_RS05135	0.54	-2.4
1,145,871	-		PFLU_RS05135	0.63	-1.5
1,145,951	+		PFLU_RS05135	0.69	+0.2
1,145,951	+		PFLU_RS05135	0.69	-0.6
1,145,952	-		PFLU_RS05135	0.69	-0.9
1,145,952	-		PFLU_RS05135	0.69	-0.1
1,145,954	+		PFLU_RS05135	0.69	-1.5
1,145,954	+		PFLU_RS05135	0.69	-1.1
1,145,954	+		PFLU_RS05135	0.69	-1.1
1,145,954	+		PFLU_RS05135	0.69	-1.4
1,145,954	+		PFLU_RS05135	0.69	-1.1
1,145,954	+		PFLU_RS05135	0.69	+0.5
1,145,954	+		PFLU_RS05135	0.69	-1.6
1,145,954	+		PFLU_RS05135	0.69	+0.2
1,145,954	+		PFLU_RS05135	0.69	-1.0
1,145,954	+		PFLU_RS05135	0.69	+0.1
1,145,954	+		PFLU_RS05135	0.69	-1.8
1,145,954	+		PFLU_RS05135	0.69	+0.2
1,145,954	+		PFLU_RS05135	0.69	-1.9
1,145,954	+		PFLU_RS05135	0.69	-1.4
1,145,955	-		PFLU_RS05135	0.69	-1.3
1,145,955	-		PFLU_RS05135	0.69	+0.3
1,145,955	-		PFLU_RS05135	0.69	-2.6
1,145,955	-		PFLU_RS05135	0.69	+1.0
1,145,955	-		PFLU_RS05135	0.69	-3.4
1,145,955	-		PFLU_RS05135	0.69	-3.2
1,145,955	-		PFLU_RS05135	0.69	+0.6
1,145,955	-		PFLU_RS05135	0.69	-0.1
1,145,955	-		PFLU_RS05135	0.69	-0.5
1,145,955	-		PFLU_RS05135	0.69	-2.4
1,145,955	-		PFLU_RS05135	0.69	-2.9
1,145,955	-		PFLU_RS05135	0.69	-2.0
1,145,987	+		PFLU_RS05135	0.71	-2.4
1,145,987	+		PFLU_RS05135	0.71	-1.9
1,145,987	+		PFLU_RS05135	0.71	+1.2
1,145,988	-		PFLU_RS05135	0.71	+1.2
1,146,168	+		PFLU_RS05135	0.84	-2.3
1,146,169	-		PFLU_RS05135	0.85	-1.0
1,146,358	+				-1.6
1,146,358	+				-0.1
1,146,358	+				+0.5
1,146,359	-				-2.7
1,146,384	+				-0.9
1,146,384	+				-1.9
1,146,385	-				-0.9
1,146,392	+				-0.1
1,146,392	+				-0.8
1,146,393	-				-0.1
1,146,406	+				-2.0
1,146,406	+				-0.4
1,146,407	-				-1.5
1,146,428	+				+1.4
1,146,429	-				+1.8
1,146,452	-				+0.0
1,146,485	+				-0.0
1,146,512	-				+2.8
1,146,546	+				+2.2
1,146,546	+				-1.4
1,146,546	+				-2.9
1,146,546	+				+0.9
1,146,546	+				-0.7
1,146,546	+				+0.1
1,146,546	+				-0.1
1,146,546	+				-0.4
1,146,546	+				-1.9
1,146,546	+				-2.4
1,146,546	+				-2.1
1,146,546	+				-2.6
1,146,546	+				-1.6
1,146,546	+				-1.9
1,146,546	+				-2.2
1,146,546	+				-2.5
1,146,546	+				-1.4
1,146,546	+				-0.4
1,146,547	-				-1.4
1,146,547	-				-2.8
1,146,547	-				-1.2
1,146,547	-				-0.8
1,146,547	-				+0.2
1,146,547	-				-2.7
1,146,547	-				-0.6
1,146,547	-				-1.2
1,146,547	-				+0.3
1,146,547	-				-0.9
1,146,547	-				-0.4
1,146,547	-				+1.2
1,146,547	-				+1.6
1,146,547	-				-1.4
1,146,547	-				+1.8
1,146,547	-				-3.9
1,146,594	-				+0.5
1,146,703	+		PFLU_RS05140	0.19	-1.7
1,146,704	-		PFLU_RS05140	0.20	-0.0
1,146,753	+		PFLU_RS05140	0.25	-0.9
1,146,754	-		PFLU_RS05140	0.25	+1.0
1,146,979	-		PFLU_RS05140	0.49	-2.2
1,147,045	+		PFLU_RS05140	0.55	-2.2
1,147,045	+		PFLU_RS05140	0.55	-1.5
1,147,045	+		PFLU_RS05140	0.55	-0.8
1,147,046	-		PFLU_RS05140	0.56	+0.1
1,147,110	-		PFLU_RS05140	0.62	-1.4
1,147,110	-		PFLU_RS05140	0.62	-0.9
1,147,128	+		PFLU_RS05140	0.64	-1.5
1,147,128	+		PFLU_RS05140	0.64	-0.8
1,147,128	+		PFLU_RS05140	0.64	-2.7
1,147,128	+		PFLU_RS05140	0.64	-1.9
1,147,128	+		PFLU_RS05140	0.64	-2.1
1,147,128	+		PFLU_RS05140	0.64	-3.1
1,147,128	+		PFLU_RS05140	0.64	-1.4
1,147,129	-		PFLU_RS05140	0.64	-2.0
1,147,129	-		PFLU_RS05140	0.64	-2.4
1,147,129	-		PFLU_RS05140	0.64	-1.4
1,147,129	-		PFLU_RS05140	0.64	-1.5
1,147,129	-		PFLU_RS05140	0.64	-1.8
1,147,129	-		PFLU_RS05140	0.64	-2.4
1,147,129	-		PFLU_RS05140	0.64	-0.2
1,147,129	-		PFLU_RS05140	0.64	-1.3
1,147,129	-		PFLU_RS05140	0.64	-1.1
1,147,129	-		PFLU_RS05140	0.64	-0.7
1,147,134	+		PFLU_RS05140	0.65	-1.9
1,147,134	+		PFLU_RS05140	0.65	-1.6
1,147,135	-		PFLU_RS05140	0.65	+0.4
1,147,152	+		PFLU_RS05140	0.67	-1.9
1,147,152	+		PFLU_RS05140	0.67	+0.0
1,147,153	-		PFLU_RS05140	0.67	-0.4
1,147,153	-		PFLU_RS05140	0.67	+0.1
1,147,153	-		PFLU_RS05140	0.67	-0.8
1,147,153	-		PFLU_RS05140	0.67	-0.9
1,147,199	+		PFLU_RS05140	0.72	-0.6
1,147,199	+		PFLU_RS05140	0.72	-2.7
1,147,199	+		PFLU_RS05140	0.72	-2.0
1,147,199	+		PFLU_RS05140	0.72	-2.1
1,147,199	+		PFLU_RS05140	0.72	-0.6
1,147,199	+		PFLU_RS05140	0.72	-1.1
1,147,199	+		PFLU_RS05140	0.72	+0.2
1,147,199	+		PFLU_RS05140	0.72	-1.9
1,147,199	+		PFLU_RS05140	0.72	-1.4
1,147,199	+		PFLU_RS05140	0.72	-1.1
1,147,199	+		PFLU_RS05140	0.72	-1.9
1,147,200	-		PFLU_RS05140	0.72	-2.1
1,147,200	-		PFLU_RS05140	0.72	+0.6
1,147,200	-		PFLU_RS05140	0.72	-1.4
1,147,200	-		PFLU_RS05140	0.72	-0.4
1,147,200	-		PFLU_RS05140	0.72	-1.7
1,147,200	-		PFLU_RS05140	0.72	-1.1
1,147,200	-		PFLU_RS05140	0.72	+0.6
1,147,200	-		PFLU_RS05140	0.72	-1.4
1,147,200	-		PFLU_RS05140	0.72	+1.6
1,147,200	-		PFLU_RS05140	0.72	+1.4
1,147,200	-		PFLU_RS05140	0.72	-1.4
1,147,200	-		PFLU_RS05140	0.72	-1.5
1,147,200	-		PFLU_RS05140	0.72	-0.8
1,147,344	+		PFLU_RS05140	0.87	-1.4
1,147,344	+		PFLU_RS05140	0.87	-0.9
1,147,344	+		PFLU_RS05140	0.87	-0.4
1,147,344	+		PFLU_RS05140	0.87	-2.3
1,147,344	+		PFLU_RS05140	0.87	+0.6
1,147,345	-		PFLU_RS05140	0.87	-0.1
1,147,345	-		PFLU_RS05140	0.87	-0.1
1,147,356	+		PFLU_RS05140	0.88	-1.5
1,147,356	+		PFLU_RS05140	0.88	-1.7
1,147,356	+		PFLU_RS05140	0.88	-1.7
1,147,356	+		PFLU_RS05140	0.88	-1.6
1,147,357	-		PFLU_RS05140	0.88	+0.8
1,147,357	-		PFLU_RS05140	0.88	-1.7