Experiment: Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06010 and BWI76_RS06015 are separated by 46 nucleotides BWI76_RS06015 and BWI76_RS06020 are separated by 76 nucleotides
BWI76_RS06010: BWI76_RS06010 - ethanolamine permease, at 1,261,137 to 1,262,516
_RS06010
BWI76_RS06015: BWI76_RS06015 - hypothetical protein, at 1,262,563 to 1,262,748
_RS06015
BWI76_RS06020: BWI76_RS06020 - glycoside hydrolase, at 1,262,825 to 1,264,207
_RS06020
Position (kb) 1262
1263 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1261.663 kb on - strand, within BWI76_RS06010 at 1261.860 kb on - strand, within BWI76_RS06010 at 1261.877 kb on - strand, within BWI76_RS06010 at 1261.916 kb on + strand, within BWI76_RS06010 at 1262.066 kb on + strand, within BWI76_RS06010 at 1262.074 kb on - strand, within BWI76_RS06010 at 1262.074 kb on - strand, within BWI76_RS06010 at 1262.261 kb on + strand, within BWI76_RS06010 at 1262.261 kb on + strand, within BWI76_RS06010 at 1262.261 kb on + strand, within BWI76_RS06010 at 1262.549 kb on - strand at 1262.643 kb on + strand, within BWI76_RS06015 at 1262.646 kb on - strand, within BWI76_RS06015 at 1262.749 kb on - strand at 1262.788 kb on - strand at 1262.790 kb on + strand at 1262.871 kb on + strand at 1262.926 kb on + strand at 1262.945 kb on - strand at 1263.051 kb on + strand, within BWI76_RS06020 at 1263.088 kb on + strand, within BWI76_RS06020 at 1263.127 kb on + strand, within BWI76_RS06020 at 1263.135 kb on - strand, within BWI76_RS06020 at 1263.135 kb on - strand, within BWI76_RS06020 at 1263.135 kb on - strand, within BWI76_RS06020 at 1263.183 kb on + strand, within BWI76_RS06020 at 1263.376 kb on + strand, within BWI76_RS06020 at 1263.397 kb on - strand, within BWI76_RS06020 at 1263.408 kb on + strand, within BWI76_RS06020 at 1263.534 kb on - strand, within BWI76_RS06020 at 1263.646 kb on - strand, within BWI76_RS06020
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL remove 1,261,663 - BWI76_RS06010 0.38 +0.4 1,261,860 - BWI76_RS06010 0.52 -3.7 1,261,877 - BWI76_RS06010 0.54 +0.1 1,261,916 + BWI76_RS06010 0.56 +0.2 1,262,066 + BWI76_RS06010 0.67 +0.2 1,262,074 - BWI76_RS06010 0.68 -0.1 1,262,074 - BWI76_RS06010 0.68 +0.9 1,262,261 + BWI76_RS06010 0.81 -1.7 1,262,261 + BWI76_RS06010 0.81 +0.3 1,262,261 + BWI76_RS06010 0.81 +0.7 1,262,549 - +0.3 1,262,643 + BWI76_RS06015 0.43 -1.8 1,262,646 - BWI76_RS06015 0.45 -1.4 1,262,749 - +0.3 1,262,788 - -0.6 1,262,790 + +1.6 1,262,871 + +0.9 1,262,926 + +0.0 1,262,945 - +1.1 1,263,051 + BWI76_RS06020 0.16 +0.2 1,263,088 + BWI76_RS06020 0.19 -0.2 1,263,127 + BWI76_RS06020 0.22 -0.1 1,263,135 - BWI76_RS06020 0.22 +0.3 1,263,135 - BWI76_RS06020 0.22 +0.6 1,263,135 - BWI76_RS06020 0.22 -2.3 1,263,183 + BWI76_RS06020 0.26 +0.3 1,263,376 + BWI76_RS06020 0.40 +0.4 1,263,397 - BWI76_RS06020 0.41 +0.6 1,263,408 + BWI76_RS06020 0.42 -2.1 1,263,534 - BWI76_RS06020 0.51 -1.6 1,263,646 - BWI76_RS06020 0.59 +0.3
Or see this region's nucleotide sequence