Experiment: Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02460 and BWI76_RS02465 are separated by 119 nucleotides BWI76_RS02465 and BWI76_RS02470 are separated by 24 nucleotides
BWI76_RS02460: BWI76_RS02460 - elongation factor P lysine(34) lysyltransferase, at 503,733 to 504,710
_RS02460
BWI76_RS02465: BWI76_RS02465 - miniconductance mechanosensitive channel MscM, at 504,830 to 508,156
_RS02465
BWI76_RS02470: BWI76_RS02470 - phosphatidylserine decarboxylase, at 508,181 to 509,143
_RS02470
Position (kb) 504
505
506
507
508
509 Strain fitness (log2 ratio) -1
0
1
2
3 at 504.818 kb on - strand at 504.869 kb on + strand at 504.905 kb on + strand at 504.913 kb on - strand at 505.004 kb on - strand at 505.183 kb on - strand, within BWI76_RS02465 at 505.285 kb on - strand, within BWI76_RS02465 at 505.339 kb on + strand, within BWI76_RS02465 at 505.870 kb on + strand, within BWI76_RS02465 at 506.056 kb on - strand, within BWI76_RS02465 at 506.356 kb on + strand, within BWI76_RS02465 at 506.585 kb on + strand, within BWI76_RS02465 at 506.586 kb on - strand, within BWI76_RS02465 at 506.623 kb on + strand, within BWI76_RS02465 at 506.870 kb on - strand at 506.985 kb on - strand, within BWI76_RS02465 at 506.990 kb on - strand, within BWI76_RS02465 at 507.016 kb on - strand, within BWI76_RS02465 at 507.054 kb on + strand, within BWI76_RS02465 at 507.119 kb on - strand, within BWI76_RS02465 at 507.301 kb on + strand, within BWI76_RS02465 at 507.374 kb on - strand, within BWI76_RS02465 at 507.506 kb on - strand, within BWI76_RS02465 at 507.567 kb on + strand, within BWI76_RS02465 at 507.631 kb on + strand, within BWI76_RS02465 at 507.653 kb on - strand, within BWI76_RS02465 at 507.806 kb on - strand, within BWI76_RS02465 at 507.852 kb on - strand at 507.856 kb on + strand at 507.864 kb on - strand at 507.993 kb on - strand at 508.023 kb on + strand at 508.031 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL remove 504,818 - -0.1 504,869 + -0.6 504,905 + +0.5 504,913 - +0.1 505,004 - -0.0 505,183 - BWI76_RS02465 0.11 -0.1 505,285 - BWI76_RS02465 0.14 -0.3 505,339 + BWI76_RS02465 0.15 +0.2 505,870 + BWI76_RS02465 0.31 -0.0 506,056 - BWI76_RS02465 0.37 -0.5 506,356 + BWI76_RS02465 0.46 +0.8 506,585 + BWI76_RS02465 0.53 +0.5 506,586 - BWI76_RS02465 0.53 +0.1 506,623 + BWI76_RS02465 0.54 -0.4 506,870 - +1.0 506,985 - BWI76_RS02465 0.65 +0.2 506,990 - BWI76_RS02465 0.65 -0.1 507,016 - BWI76_RS02465 0.66 +1.2 507,054 + BWI76_RS02465 0.67 +0.1 507,119 - BWI76_RS02465 0.69 +0.7 507,301 + BWI76_RS02465 0.74 +1.1 507,374 - BWI76_RS02465 0.76 -0.0 507,506 - BWI76_RS02465 0.80 -0.6 507,567 + BWI76_RS02465 0.82 -0.1 507,631 + BWI76_RS02465 0.84 +0.2 507,653 - BWI76_RS02465 0.85 +3.2 507,806 - BWI76_RS02465 0.89 +1.2 507,852 - +0.8 507,856 + +0.6 507,864 - -1.6 507,993 - +0.6 508,023 + +0.2 508,031 - -0.7
Or see this region's nucleotide sequence