Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20640
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,318,350 | - | +0.3 | |||
4,318,443 | + | BWI76_RS20635 | 0.20 | -1.7 | |
4,318,539 | - | BWI76_RS20635 | 0.33 | -0.1 | |
4,318,624 | - | BWI76_RS20635 | 0.44 | +0.1 | |
4,318,864 | - | BWI76_RS20635 | 0.76 | +0.1 | |
4,318,897 | + | BWI76_RS20635 | 0.80 | +0.1 | |
4,318,970 | - | BWI76_RS20635 | 0.90 | -0.5 | |
4,319,067 | + | +0.7 | |||
4,319,160 | + | -1.7 | |||
4,319,202 | - | -1.4 | |||
4,319,239 | + | -1.3 | |||
4,319,461 | + | BWI76_RS20640 | 0.26 | +0.3 | |
4,319,469 | - | BWI76_RS20640 | 0.27 | -1.1 | |
4,319,483 | + | BWI76_RS20640 | 0.28 | -1.7 | |
4,319,507 | + | BWI76_RS20640 | 0.31 | -1.2 | |
4,319,530 | + | BWI76_RS20640 | 0.33 | -2.7 | |
4,319,820 | - | BWI76_RS20640 | 0.63 | +0.3 | |
4,319,865 | - | BWI76_RS20640 | 0.68 | +0.9 | |
4,320,263 | - | -0.2 | |||
4,320,449 | + | -0.3 | |||
4,320,786 | - | BWI76_RS20645 | 0.87 | +0.9 | |
4,321,146 | - | BWI76_RS20650 | 0.16 | -0.1 |
Or see this region's nucleotide sequence