Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20220
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,237,357 | - | BWI76_RS20215 | 0.51 | -2.2 | |
4,237,658 | + | BWI76_RS20215 | 0.67 | -0.2 | |
4,237,666 | - | BWI76_RS20215 | 0.68 | +0.0 | |
4,237,921 | + | BWI76_RS20215 | 0.82 | +0.1 | |
4,237,930 | + | BWI76_RS20215 | 0.82 | -1.2 | |
4,237,967 | - | BWI76_RS20215 | 0.84 | +1.0 | |
4,238,082 | + | -0.0 | |||
4,238,124 | + | +0.3 | |||
4,238,156 | + | +0.4 | |||
4,238,231 | - | +0.9 | |||
4,238,251 | + | -0.5 | |||
4,238,558 | - | BWI76_RS20220 | 0.34 | +0.3 | |
4,238,720 | - | BWI76_RS20220 | 0.59 | +1.2 | |
4,238,738 | - | BWI76_RS20220 | 0.61 | +1.0 | |
4,238,979 | + | +0.3 | |||
4,238,979 | + | -0.5 | |||
4,238,979 | + | -0.8 | |||
4,238,979 | + | +0.1 | |||
4,238,987 | - | +0.0 | |||
4,239,045 | - | +0.2 | |||
4,239,045 | - | +0.5 | |||
4,239,226 | + | BWI76_RS20225 | 0.45 | -1.2 | |
4,239,369 | + | BWI76_RS20225 | 0.74 | +0.4 | |
4,239,469 | + | +0.0 | |||
4,239,516 | + | +0.7 | |||
4,239,637 | - | BWI76_RS20230 | 0.11 | +0.7 | |
4,239,643 | + | BWI76_RS20230 | 0.13 | +0.5 |
Or see this region's nucleotide sequence