Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19420

Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
4,049,289	-		BWI76_RS19410	0.23	-2.8
4,049,374	-		BWI76_RS19410	0.49	+1.4
4,049,411	-		BWI76_RS19410	0.61	-0.1
4,049,422	+		BWI76_RS19410	0.64	-0.2
4,049,447	-		BWI76_RS19410	0.72	-0.8
4,049,453	-		BWI76_RS19410	0.74	-0.5
4,049,460	+				+0.2
4,049,461	+		BWI76_RS19410	0.77	-0.9
4,049,466	+		BWI76_RS19410	0.78	-1.5
4,049,535	+				-0.5
4,049,553	-				+0.8
4,049,555	+				-1.2
4,049,558	-				-0.4
4,049,559	-				+0.8
4,049,594	-				-0.4
4,049,594	-				-0.0
4,049,594	-				+0.3
4,049,650	-		BWI76_RS19415	0.17	+0.3
4,049,650	-		BWI76_RS19415	0.17	-0.1
4,049,665	+		BWI76_RS19415	0.22	-0.8
4,049,673	-		BWI76_RS19415	0.24	+1.0
4,049,719	-		BWI76_RS19415	0.38	+0.6
4,049,729	+		BWI76_RS19415	0.41	+0.6
4,049,785	-		BWI76_RS19415	0.58	-0.3
4,049,787	-		BWI76_RS19415	0.58	-0.8
4,049,787	-		BWI76_RS19415	0.58	+0.3
4,049,813	-		BWI76_RS19415	0.66	-0.2
4,049,826	-				+1.8
4,049,827	+		BWI76_RS19415	0.71	-1.5
4,049,828	+		BWI76_RS19415	0.71	+0.8
4,049,835	-		BWI76_RS19415	0.73	-1.0
4,049,844	-		BWI76_RS19415	0.76	-1.4
4,049,844	-		BWI76_RS19415	0.76	-0.2
4,049,844	-		BWI76_RS19415	0.76	-1.4
4,049,857	-		BWI76_RS19415	0.80	+0.7
4,049,857	-		BWI76_RS19415	0.80	+0.2
4,049,895	-				-0.7
4,049,911	-				-0.9
4,049,938	-				+0.8
4,049,938	-				+0.3
4,049,938	-				+0.5
4,049,948	-				+0.1
4,049,948	-				+0.1
4,049,982	+				-0.5
4,049,985	-				-0.4
4,049,985	-				-0.7
4,049,990	-				-0.2
4,049,992	-				-0.0
4,049,993	-				+1.1
4,050,007	+				+1.2
4,050,057	+				+0.7
4,050,060	-				-0.8
4,050,065	-				-0.8
4,050,065	-				-1.5
4,050,065	-				+0.1
4,050,067	+				-0.4
4,050,067	+				-0.3
4,050,067	+				+0.1
4,050,067	+				-0.4
4,050,067	+				-0.6
4,050,067	+				+0.8
4,050,067	+				+0.7
4,050,067	+				+0.5
4,050,067	+				+0.2
4,050,075	-				-0.6
4,050,075	-				+0.4
4,050,075	-				-1.0
4,050,075	-				+0.8
4,050,075	-				-2.0
4,050,080	-				+1.4
4,050,080	-				-0.6
4,050,089	+				+0.1
4,050,097	-				+0.5
4,050,097	-				+0.2
4,050,132	-				-1.5
4,050,135	+				-0.0
4,050,135	+				+0.8
4,050,135	+				+0.2
4,050,187	-				+0.2
4,050,246	-				-0.8
4,050,246	-				+2.8
4,050,253	-				+0.3
4,050,253	-				-2.0
4,050,255	+				+1.0
4,050,255	+				+0.1
4,050,255	+				-0.5
4,050,255	+				+0.5
4,050,255	+				+0.8
4,050,255	+				+0.3
4,050,255	+				+0.2
4,050,255	+				+0.2
4,050,255	+				+0.2
4,050,255	+				+1.2
4,050,255	+				+0.2
4,050,255	+				+0.1
4,050,255	+				-1.2
4,050,255	+				-0.1
4,050,255	+				+0.4
4,050,263	-				+3.4
4,050,263	-				-1.6
4,050,263	-				-1.4
4,050,263	-				-0.5
4,050,263	-				+0.8
4,050,263	-				+3.8
4,050,263	-				+0.2
4,050,263	-				+0.6
4,050,263	-				-0.4
4,050,263	-				-0.2
4,050,263	-				-2.9
4,050,263	-				+0.7
4,050,263	-				-0.2
4,050,263	-				+0.2
4,050,263	-				+1.8
4,050,263	-				-0.2
4,050,263	-				-0.2
4,050,275	-				-0.4
4,050,320	+				-3.2
4,050,396	-		BWI76_RS19420	0.11	-0.2
4,050,439	-		BWI76_RS19420	0.15	-1.2
4,050,514	+		BWI76_RS19420	0.22	-1.8
4,050,641	+		BWI76_RS19420	0.33	-0.5
4,050,752	-		BWI76_RS19420	0.43	-2.9
4,050,757	-		BWI76_RS19420	0.44	-1.2
4,050,797	+		BWI76_RS19420	0.47	-1.2
4,050,805	-		BWI76_RS19420	0.48	-0.9
4,051,036	-		BWI76_RS19420	0.69	-2.2
4,051,132	+		BWI76_RS19420	0.77	-1.2
4,051,169	+		BWI76_RS19420	0.81	-1.2
4,051,177	-		BWI76_RS19420	0.81	-0.7
4,051,191	+		BWI76_RS19420	0.83	-0.4
4,051,251	+		BWI76_RS19420	0.88	-2.6
4,051,467	-				+0.4