Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18200
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 3,779,775 | + | BWI76_RS18195 | 0.21 | +0.3 | |
| 3,779,814 | + | BWI76_RS18195 | 0.25 | +0.1 | |
| 3,780,107 | - | BWI76_RS18195 | 0.54 | -0.3 | |
| 3,780,317 | - | BWI76_RS18195 | 0.74 | -0.1 | |
| 3,780,878 | + | BWI76_RS18200 | 0.27 | -0.7 | |
| 3,780,878 | + | BWI76_RS18200 | 0.27 | +0.7 | |
| 3,780,886 | - | BWI76_RS18200 | 0.28 | +0.1 | |
| 3,780,886 | - | BWI76_RS18200 | 0.28 | +0.9 | |
| 3,780,886 | - | BWI76_RS18200 | 0.28 | +2.0 | |
| 3,780,886 | - | BWI76_RS18200 | 0.28 | -0.5 | |
| 3,780,886 | - | BWI76_RS18200 | 0.28 | -0.2 | |
| 3,780,886 | - | BWI76_RS18200 | 0.28 | +1.4 | |
| 3,781,070 | - | BWI76_RS18200 | 0.53 | +0.6 | |
| 3,781,327 | + | BWI76_RS18200 | 0.88 | +0.4 | |
| 3,781,875 | + | BWI76_RS18205 | 0.68 | +0.3 | |
| 3,782,146 | + | -1.3 | |||
| 3,782,184 | - | +0.1 | |||
| 3,782,196 | - | -0.1 | |||
| 3,782,211 | + | -0.8 |
Or see this region's nucleotide sequence