Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16880
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,499,376 | - | BWI76_RS16870 | 0.73 | -0.0 | |
3,499,812 | + | BWI76_RS16875 | 0.14 | -1.1 | |
3,499,991 | + | BWI76_RS16875 | 0.44 | -0.1 | |
3,500,040 | - | BWI76_RS16875 | 0.53 | -0.2 | |
3,500,097 | + | BWI76_RS16875 | 0.62 | +0.6 | |
3,500,156 | + | BWI76_RS16875 | 0.72 | +0.3 | |
3,500,170 | - | -0.1 | |||
3,500,658 | - | BWI76_RS16880 | 0.21 | +0.3 | |
3,500,753 | - | BWI76_RS16880 | 0.27 | +0.9 | |
3,500,885 | + | BWI76_RS16880 | 0.35 | +0.6 | |
3,501,077 | + | BWI76_RS16880 | 0.48 | +1.4 | |
3,501,351 | + | BWI76_RS16880 | 0.65 | +0.1 | |
3,501,675 | + | BWI76_RS16880 | 0.85 | -0.7 | |
3,501,873 | - | +0.2 | |||
3,501,896 | - | -0.5 | |||
3,502,166 | - | +0.2 | |||
3,502,434 | + | +0.2 | |||
3,502,831 | - | BWI76_RS16890 | 0.56 | -1.5 |
Or see this region's nucleotide sequence