Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10935
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,308,325 | - | BWI76_RS10930 | 0.47 | -0.1 | |
2,308,504 | - | BWI76_RS10930 | 0.58 | -0.7 | |
2,308,544 | + | BWI76_RS10930 | 0.61 | -2.3 | |
2,308,633 | - | BWI76_RS10930 | 0.66 | +0.4 | |
2,308,882 | + | BWI76_RS10930 | 0.82 | -1.6 | |
2,309,377 | + | -2.7 | |||
2,309,383 | - | -2.6 | |||
2,309,655 | - | BWI76_RS10935 | 0.20 | -1.9 | |
2,309,778 | - | BWI76_RS10935 | 0.25 | -1.8 | |
2,309,847 | + | BWI76_RS10935 | 0.28 | -1.9 | |
2,310,070 | - | BWI76_RS10935 | 0.36 | +0.9 | |
2,310,385 | + | BWI76_RS10935 | 0.49 | -1.3 | |
2,310,395 | - | BWI76_RS10935 | 0.49 | -0.1 | |
2,310,924 | - | BWI76_RS10935 | 0.70 | -1.1 | |
2,311,155 | - | BWI76_RS10935 | 0.79 | +0.9 | |
2,312,304 | - | BWI76_RS10945 | 0.86 | +0.1 | |
2,312,539 | - | +0.7 |
Or see this region's nucleotide sequence