Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09565
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,000,108 | - | +0.3 | |||
2,000,178 | + | -0.7 | |||
2,000,441 | - | BWI76_RS09560 | 0.34 | +0.4 | |
2,000,602 | - | BWI76_RS09560 | 0.71 | -0.1 | |
2,000,916 | - | BWI76_RS09565 | 0.15 | +0.8 | |
2,000,965 | + | BWI76_RS09565 | 0.20 | +0.5 | |
2,001,280 | + | BWI76_RS09565 | 0.53 | +1.2 | |
2,001,288 | - | BWI76_RS09565 | 0.54 | +0.3 | |
2,001,446 | - | BWI76_RS09565 | 0.70 | +1.1 | |
2,001,562 | + | BWI76_RS09565 | 0.82 | +1.9 | |
2,001,966 | + | BWI76_RS09570 | 0.13 | -0.8 | |
2,002,022 | + | BWI76_RS09570 | 0.17 | -0.2 | |
2,002,096 | - | BWI76_RS09570 | 0.21 | -0.3 | |
2,002,134 | - | BWI76_RS09570 | 0.23 | -0.2 | |
2,002,249 | - | BWI76_RS09570 | 0.30 | +0.2 | |
2,002,592 | + | BWI76_RS09570 | 0.51 | -0.3 | |
2,002,643 | + | BWI76_RS09570 | 0.54 | +1.4 | |
2,002,668 | + | BWI76_RS09570 | 0.56 | -0.3 |
Or see this region's nucleotide sequence