Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06280
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,321,305 | + | BWI76_RS06275 | 0.69 | +0.1 | |
1,321,305 | + | BWI76_RS06275 | 0.69 | -0.4 | |
1,321,532 | + | BWI76_RS06275 | 0.78 | +0.3 | |
1,321,540 | - | BWI76_RS06275 | 0.78 | -0.2 | |
1,321,611 | + | BWI76_RS06275 | 0.81 | -1.0 | |
1,321,813 | + | BWI76_RS06275 | 0.88 | +0.2 | |
1,321,893 | + | +0.4 | |||
1,321,924 | - | -0.4 | |||
1,321,959 | + | -0.1 | |||
1,322,039 | + | +1.0 | |||
1,322,152 | - | +0.1 | |||
1,322,475 | - | BWI76_RS06280 | 0.25 | +1.1 | |
1,322,707 | + | BWI76_RS06280 | 0.42 | +0.8 | |
1,322,829 | + | BWI76_RS06280 | 0.51 | -0.2 | |
1,322,888 | + | BWI76_RS06280 | 0.55 | +1.0 | |
1,322,990 | - | BWI76_RS06280 | 0.62 | -0.3 | |
1,323,360 | - | BWI76_RS06280 | 0.89 | +0.4 | |
1,323,399 | + | +0.7 | |||
1,323,696 | + | BWI76_RS06285 | 0.22 | -1.2 | |
1,323,804 | - | BWI76_RS06285 | 0.39 | +0.3 | |
1,323,832 | - | BWI76_RS06285 | 0.44 | -0.4 | |
1,323,898 | + | BWI76_RS06285 | 0.55 | +0.7 | |
1,323,906 | + | BWI76_RS06285 | 0.56 | +0.2 | |
1,324,017 | - | BWI76_RS06285 | 0.75 | +1.0 | |
1,324,044 | + | BWI76_RS06285 | 0.79 | -0.9 | |
1,324,237 | - | +0.3 |
Or see this region's nucleotide sequence