Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06020 and BWI76_RS06025 are separated by 229 nucleotides BWI76_RS06025 and BWI76_RS06030 overlap by 14 nucleotides
BWI76_RS06020: BWI76_RS06020 - glycoside hydrolase, at 1,262,825 to 1,264,207
_RS06020
BWI76_RS06025: BWI76_RS06025 - amino acid transporter, at 1,264,437 to 1,265,843
_RS06025
BWI76_RS06030: BWI76_RS06030 - homocysteine S-methyltransferase, at 1,265,830 to 1,266,762
_RS06030
Position (kb) 1264
1265
1266 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1263.534 kb on - strand, within BWI76_RS06020 at 1263.646 kb on - strand, within BWI76_RS06020 at 1263.810 kb on + strand, within BWI76_RS06020 at 1263.905 kb on + strand, within BWI76_RS06020 at 1264.012 kb on - strand, within BWI76_RS06020 at 1264.538 kb on - strand at 1264.592 kb on - strand, within BWI76_RS06025 at 1264.658 kb on + strand, within BWI76_RS06025 at 1264.696 kb on + strand, within BWI76_RS06025 at 1264.722 kb on - strand, within BWI76_RS06025 at 1264.823 kb on + strand, within BWI76_RS06025 at 1264.824 kb on - strand, within BWI76_RS06025 at 1264.883 kb on + strand, within BWI76_RS06025 at 1264.920 kb on + strand, within BWI76_RS06025 at 1264.952 kb on - strand, within BWI76_RS06025 at 1265.350 kb on + strand, within BWI76_RS06025 at 1265.492 kb on + strand, within BWI76_RS06025 at 1265.492 kb on + strand, within BWI76_RS06025 at 1265.648 kb on - strand, within BWI76_RS06025 at 1265.727 kb on - strand at 1265.774 kb on + strand at 1265.929 kb on - strand, within BWI76_RS06030 at 1265.977 kb on - strand, within BWI76_RS06030 at 1266.125 kb on + strand, within BWI76_RS06030 at 1266.148 kb on - strand, within BWI76_RS06030 at 1266.405 kb on + strand, within BWI76_RS06030 at 1266.410 kb on + strand, within BWI76_RS06030 at 1266.410 kb on + strand, within BWI76_RS06030 at 1266.410 kb on + strand, within BWI76_RS06030 at 1266.418 kb on - strand, within BWI76_RS06030 at 1266.418 kb on - strand, within BWI76_RS06030 at 1266.764 kb on - strand at 1266.764 kb on - strand at 1266.786 kb on + strand at 1266.804 kb on - strand at 1266.831 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL remove 1,263,534 - BWI76_RS06020 0.51 -2.4 1,263,646 - BWI76_RS06020 0.59 +0.0 1,263,810 + BWI76_RS06020 0.71 +0.2 1,263,905 + BWI76_RS06020 0.78 -0.7 1,264,012 - BWI76_RS06020 0.86 +0.5 1,264,538 - +0.4 1,264,592 - BWI76_RS06025 0.11 +0.4 1,264,658 + BWI76_RS06025 0.16 +0.1 1,264,696 + BWI76_RS06025 0.18 +0.2 1,264,722 - BWI76_RS06025 0.20 +1.8 1,264,823 + BWI76_RS06025 0.27 +1.2 1,264,824 - BWI76_RS06025 0.28 -0.1 1,264,883 + BWI76_RS06025 0.32 +0.7 1,264,920 + BWI76_RS06025 0.34 +0.4 1,264,952 - BWI76_RS06025 0.37 +0.4 1,265,350 + BWI76_RS06025 0.65 +1.5 1,265,492 + BWI76_RS06025 0.75 +0.6 1,265,492 + BWI76_RS06025 0.75 +0.8 1,265,648 - BWI76_RS06025 0.86 +1.8 1,265,727 - +0.8 1,265,774 + -1.5 1,265,929 - BWI76_RS06030 0.11 -1.5 1,265,977 - BWI76_RS06030 0.16 -1.6 1,266,125 + BWI76_RS06030 0.32 -0.5 1,266,148 - BWI76_RS06030 0.34 -0.8 1,266,405 + BWI76_RS06030 0.62 -1.8 1,266,410 + BWI76_RS06030 0.62 -0.6 1,266,410 + BWI76_RS06030 0.62 +0.1 1,266,410 + BWI76_RS06030 0.62 +0.1 1,266,418 - BWI76_RS06030 0.63 -0.6 1,266,418 - BWI76_RS06030 0.63 -2.0 1,266,764 - +0.3 1,266,764 - -2.7 1,266,786 + -0.0 1,266,804 - -0.2 1,266,831 - +0.8
Or see this region's nucleotide sequence