Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04270 and BWI76_RS04275 are separated by 99 nucleotides BWI76_RS04275 and BWI76_RS04280 are separated by 120 nucleotides
BWI76_RS04270: BWI76_RS04270 - transaldolase, at 879,739 to 880,692
_RS04270
BWI76_RS04275: BWI76_RS04275 - molybdopterin adenylyltransferase, at 880,792 to 881,379
_RS04275
BWI76_RS04280: BWI76_RS04280 - MFS transporter, at 881,500 to 882,810
_RS04280
Position (kb) 880
881
882 Strain fitness (log2 ratio) -1
0
1
2
3 at 879.873 kb on - strand, within BWI76_RS04270 at 880.036 kb on + strand, within BWI76_RS04270 at 880.041 kb on + strand, within BWI76_RS04270 at 880.202 kb on - strand, within BWI76_RS04270 at 880.446 kb on + strand, within BWI76_RS04270 at 880.516 kb on - strand, within BWI76_RS04270 at 880.517 kb on + strand, within BWI76_RS04270 at 880.729 kb on - strand at 880.729 kb on - strand at 880.735 kb on + strand at 880.854 kb on + strand, within BWI76_RS04275 at 880.862 kb on - strand at 880.890 kb on - strand, within BWI76_RS04275 at 880.899 kb on + strand, within BWI76_RS04275 at 880.899 kb on + strand, within BWI76_RS04275 at 880.944 kb on + strand, within BWI76_RS04275 at 880.944 kb on + strand, within BWI76_RS04275 at 881.101 kb on + strand, within BWI76_RS04275 at 881.177 kb on + strand, within BWI76_RS04275 at 881.177 kb on + strand, within BWI76_RS04275 at 881.185 kb on - strand, within BWI76_RS04275 at 881.215 kb on + strand, within BWI76_RS04275 at 881.508 kb on - strand at 881.704 kb on - strand, within BWI76_RS04280 at 881.872 kb on + strand, within BWI76_RS04280 at 882.024 kb on + strand, within BWI76_RS04280 at 882.032 kb on - strand, within BWI76_RS04280 at 882.032 kb on - strand, within BWI76_RS04280 at 882.050 kb on + strand, within BWI76_RS04280 at 882.192 kb on + strand, within BWI76_RS04280 at 882.343 kb on - strand, within BWI76_RS04280
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL remove 879,873 - BWI76_RS04270 0.14 -1.0 880,036 + BWI76_RS04270 0.31 +0.8 880,041 + BWI76_RS04270 0.32 -0.2 880,202 - BWI76_RS04270 0.49 -0.5 880,446 + BWI76_RS04270 0.74 -0.7 880,516 - BWI76_RS04270 0.81 -1.0 880,517 + BWI76_RS04270 0.82 -1.1 880,729 - +0.1 880,729 - +0.6 880,735 + -0.2 880,854 + BWI76_RS04275 0.11 +1.0 880,862 - +0.5 880,890 - BWI76_RS04275 0.17 +0.9 880,899 + BWI76_RS04275 0.18 +0.2 880,899 + BWI76_RS04275 0.18 +0.8 880,944 + BWI76_RS04275 0.26 +0.6 880,944 + BWI76_RS04275 0.26 +0.2 881,101 + BWI76_RS04275 0.53 +0.2 881,177 + BWI76_RS04275 0.65 +2.8 881,177 + BWI76_RS04275 0.65 +0.2 881,185 - BWI76_RS04275 0.67 +0.5 881,215 + BWI76_RS04275 0.72 +0.8 881,508 - +0.8 881,704 - BWI76_RS04280 0.16 -1.5 881,872 + BWI76_RS04280 0.28 -0.1 882,024 + BWI76_RS04280 0.40 -0.1 882,032 - BWI76_RS04280 0.41 +0.4 882,032 - BWI76_RS04280 0.41 +0.2 882,050 + BWI76_RS04280 0.42 -1.3 882,192 + BWI76_RS04280 0.53 +1.8 882,343 - BWI76_RS04280 0.64 +0.5
Or see this region's nucleotide sequence