Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04200
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
864,304 | + | +0.2 | |||
864,305 | - | -0.2 | |||
864,313 | - | +1.4 | |||
864,581 | + | BWI76_RS04200 | 0.38 | +0.5 | |
864,589 | - | BWI76_RS04200 | 0.40 | +1.8 | |
864,892 | + | BWI76_RS04200 | 0.86 | +0.4 | |
865,206 | + | BWI76_RS04205 | 0.26 | +0.4 | |
865,409 | + | BWI76_RS04205 | 0.50 | +0.5 | |
865,410 | + | BWI76_RS04205 | 0.50 | +1.5 | |
865,416 | - | BWI76_RS04205 | 0.50 | +0.2 | |
865,420 | + | BWI76_RS04205 | 0.51 | +0.9 | |
865,435 | + | BWI76_RS04205 | 0.53 | -0.2 | |
865,538 | + | BWI76_RS04205 | 0.64 | +0.1 | |
865,551 | - | BWI76_RS04205 | 0.66 | -1.3 | |
865,653 | - | BWI76_RS04205 | 0.78 | +0.7 | |
865,759 | - | BWI76_RS04205 | 0.90 | +0.6 | |
865,767 | + | +0.1 | |||
865,800 | + | +0.7 | |||
865,809 | + | +0.1 | |||
865,811 | + | +0.6 | |||
865,811 | + | -0.2 | |||
865,811 | + | -2.0 | |||
865,811 | + | -1.2 | |||
865,811 | + | +0.1 | |||
865,811 | + | +0.1 | |||
865,811 | + | +0.1 | |||
865,819 | - | -1.1 | |||
865,819 | - | +0.4 | |||
865,819 | - | +0.8 | |||
865,819 | - | +0.8 | |||
865,819 | - | -1.5 | |||
865,859 | + | +1.3 | |||
865,859 | + | +0.7 | |||
865,859 | + | -0.7 | |||
865,866 | + | +1.0 |
Or see this region's nucleotide sequence