Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07555

Experiment: L-Glutamine (C)(N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)(N); with MOPS; with chloride
1,676,645	+		PFLU_RS07550	0.34	-2.8
1,676,646	-		PFLU_RS07550	0.34	-1.1
1,676,677	+		PFLU_RS07550	0.38	-0.8
1,676,678	-		PFLU_RS07550	0.38	+0.2
1,676,678	-		PFLU_RS07550	0.38	-1.2
1,676,678	-		PFLU_RS07550	0.38	-0.8
1,676,719	+		PFLU_RS07550	0.42	-2.7
1,676,719	+		PFLU_RS07550	0.42	-1.0
1,676,720	-		PFLU_RS07550	0.42	-0.3
1,676,720	-		PFLU_RS07550	0.42	-1.1
1,676,731	+		PFLU_RS07550	0.44	-0.1
1,676,731	+		PFLU_RS07550	0.44	+2.4
1,676,731	+		PFLU_RS07550	0.44	-1.5
1,676,731	+		PFLU_RS07550	0.44	-2.2
1,676,731	+		PFLU_RS07550	0.44	-1.3
1,676,731	+		PFLU_RS07550	0.44	-0.8
1,676,731	+		PFLU_RS07550	0.44	-1.8
1,676,731	+		PFLU_RS07550	0.44	+0.3
1,676,732	-		PFLU_RS07550	0.44	+0.2
1,676,732	-		PFLU_RS07550	0.44	-2.8
1,676,732	-		PFLU_RS07550	0.44	+1.0
1,676,732	-		PFLU_RS07550	0.44	+0.5
1,676,732	-		PFLU_RS07550	0.44	+1.6
1,677,052	+		PFLU_RS07550	0.78	-1.5
1,677,268	+				-2.3
1,677,268	+				+2.2
1,677,269	-				+0.5
1,677,269	-				-0.5
1,677,287	-				+1.0
1,677,289	+				-0.1
1,677,289	+				+0.8
1,677,289	+				+2.0
1,677,289	+				-2.2
1,677,338	+				-1.5
1,677,339	-				-1.1
1,677,339	-				-0.6
1,677,380	-				+1.4
1,677,394	+				-2.5
1,677,394	+				+0.8
1,677,394	+				-3.0
1,677,394	+				+1.2
1,677,394	+				-2.5
1,677,394	+				-2.3
1,677,394	+				-1.6
1,677,395	-				-2.4
1,677,395	-				-2.0
1,677,395	-				-1.4
1,677,395	-				-0.1
1,677,395	-				-2.0
1,677,395	-				-1.9
1,677,411	+				+0.3
1,677,412	-				+0.5
1,677,472	+				-2.8
1,677,473	-				-1.5
1,677,623	+		PFLU_RS07555	0.26	-2.5
1,677,623	+		PFLU_RS07555	0.26	+0.0
1,677,662	+		PFLU_RS07555	0.32	-3.1
1,677,662	+		PFLU_RS07555	0.32	-2.8
1,677,662	+		PFLU_RS07555	0.32	-0.8
1,677,663	-		PFLU_RS07555	0.32	-1.8
1,677,663	-		PFLU_RS07555	0.32	-2.0
1,677,663	-		PFLU_RS07555	0.32	-2.0
1,677,663	-		PFLU_RS07555	0.32	+0.5
1,677,663	-		PFLU_RS07555	0.32	+1.5
1,677,663	-		PFLU_RS07555	0.32	+0.0
1,677,696	-		PFLU_RS07555	0.36	+0.0
1,677,702	+		PFLU_RS07555	0.37	-0.5
1,677,702	+		PFLU_RS07555	0.37	-0.2
1,677,702	+		PFLU_RS07555	0.37	+0.5
1,677,702	+		PFLU_RS07555	0.37	-1.1
1,677,702	+		PFLU_RS07555	0.37	+0.5
1,677,702	+		PFLU_RS07555	0.37	-2.3
1,677,702	+		PFLU_RS07555	0.37	-1.7
1,677,702	+		PFLU_RS07555	0.37	+0.7
1,677,702	+		PFLU_RS07555	0.37	-0.2
1,677,702	+		PFLU_RS07555	0.37	+0.0
1,677,702	+		PFLU_RS07555	0.37	-0.8
1,677,703	-		PFLU_RS07555	0.37	-2.8
1,677,703	-		PFLU_RS07555	0.37	+2.4
1,677,703	-		PFLU_RS07555	0.37	+0.0
1,677,703	-		PFLU_RS07555	0.37	-0.8
1,677,703	-		PFLU_RS07555	0.37	-0.5
1,677,718	+		PFLU_RS07555	0.39	-1.9
1,677,718	+		PFLU_RS07555	0.39	-2.2
1,677,719	-		PFLU_RS07555	0.39	+1.0
1,677,719	-		PFLU_RS07555	0.39	-1.1
1,677,749	+		PFLU_RS07555	0.43	-0.8
1,677,749	+		PFLU_RS07555	0.43	-2.0
1,677,749	+		PFLU_RS07555	0.43	-1.0
1,677,749	+		PFLU_RS07555	0.43	+0.3
1,677,749	+		PFLU_RS07555	0.43	-0.9
1,677,749	+		PFLU_RS07555	0.43	-1.8
1,677,749	+		PFLU_RS07555	0.43	-2.2
1,677,749	+		PFLU_RS07555	0.43	-0.5
1,677,749	+		PFLU_RS07555	0.43	-2.1
1,677,750	-		PFLU_RS07555	0.43	-0.8
1,677,750	-		PFLU_RS07555	0.43	-1.1
1,677,750	-		PFLU_RS07555	0.43	+0.7
1,677,750	-		PFLU_RS07555	0.43	-1.3
1,677,750	-		PFLU_RS07555	0.43	-0.5
1,677,750	-		PFLU_RS07555	0.43	-0.2
1,677,750	-		PFLU_RS07555	0.43	-0.6
1,677,750	-		PFLU_RS07555	0.43	+0.6
1,677,773	+		PFLU_RS07555	0.47	-2.5
1,677,773	+		PFLU_RS07555	0.47	+2.2
1,677,773	+		PFLU_RS07555	0.47	-1.6
1,677,773	+		PFLU_RS07555	0.47	-2.2
1,677,773	+		PFLU_RS07555	0.47	-1.1
1,677,773	+		PFLU_RS07555	0.47	+2.0
1,677,773	+		PFLU_RS07555	0.47	-2.9
1,677,773	+		PFLU_RS07555	0.47	+1.6
1,677,773	+		PFLU_RS07555	0.47	+1.6
1,677,773	+		PFLU_RS07555	0.47	-0.1
1,677,773	+		PFLU_RS07555	0.47	-1.3
1,677,774	-		PFLU_RS07555	0.47	-0.4
1,677,774	-		PFLU_RS07555	0.47	+1.0
1,677,774	-		PFLU_RS07555	0.47	-0.3
1,677,774	-		PFLU_RS07555	0.47	-0.8
1,677,774	-		PFLU_RS07555	0.47	-1.0
1,677,774	-		PFLU_RS07555	0.47	-2.6
1,677,774	-		PFLU_RS07555	0.47	-0.1
1,677,833	+		PFLU_RS07555	0.55	+0.5
1,677,903	-		PFLU_RS07555	0.64	-2.0
1,677,903	-		PFLU_RS07555	0.64	-1.4
1,677,903	-		PFLU_RS07555	0.64	-2.4
1,677,909	+		PFLU_RS07555	0.65	-1.1
1,677,909	+		PFLU_RS07555	0.65	-2.1
1,677,909	+		PFLU_RS07555	0.65	-0.8
1,677,910	-		PFLU_RS07555	0.65	+0.5
1,677,945	-		PFLU_RS07555	0.70	-1.9
1,677,945	-		PFLU_RS07555	0.70	-1.1
1,677,978	+		PFLU_RS07555	0.74	+2.2
1,677,978	+		PFLU_RS07555	0.74	-0.3
1,677,979	-		PFLU_RS07555	0.74	-0.5
1,678,090	+		PFLU_RS07555	0.89	-2.3
1,678,090	+		PFLU_RS07555	0.89	-2.3
1,678,090	+		PFLU_RS07555	0.89	+1.6
1,678,090	+		PFLU_RS07555	0.89	-1.8
1,678,090	+		PFLU_RS07555	0.89	-1.0
1,678,090	+		PFLU_RS07555	0.89	-1.9
1,678,091	-		PFLU_RS07555	0.89	-1.5
1,678,091	-		PFLU_RS07555	0.89	-2.0
1,678,091	-		PFLU_RS07555	0.89	-1.5
1,678,091	-		PFLU_RS07555	0.89	+0.9
1,678,091	-		PFLU_RS07555	0.89	-0.8
1,678,101	+				-1.5
1,678,101	+				+0.5
1,678,101	+				-0.4
1,678,101	+				-1.8
1,678,101	+				-1.9
1,678,101	+				-1.0
1,678,102	-				+0.6
1,678,102	-				-1.0
1,678,315	+		PFLU_RS07560	0.21	-0.2
1,678,315	+		PFLU_RS07560	0.21	+1.9
1,678,315	+		PFLU_RS07560	0.21	+0.0
1,678,315	+		PFLU_RS07560	0.21	-2.3
1,678,315	+		PFLU_RS07560	0.21	-0.2
1,678,315	+		PFLU_RS07560	0.21	+2.0
1,678,315	+		PFLU_RS07560	0.21	-1.0
1,678,316	-		PFLU_RS07560	0.21	-2.2
1,678,316	-		PFLU_RS07560	0.21	-1.0
1,678,316	-		PFLU_RS07560	0.21	-0.1
1,678,316	-		PFLU_RS07560	0.21	-1.5
1,678,316	-		PFLU_RS07560	0.21	-0.1
1,678,336	+		PFLU_RS07560	0.24	-1.8
1,678,336	+		PFLU_RS07560	0.24	+0.7
1,678,336	+		PFLU_RS07560	0.24	-0.2
1,678,336	+		PFLU_RS07560	0.24	+0.6
1,678,336	+		PFLU_RS07560	0.24	-1.7
1,678,336	+		PFLU_RS07560	0.24	+1.3
1,678,337	-		PFLU_RS07560	0.24	-2.0
1,678,337	-		PFLU_RS07560	0.24	+0.8
1,678,337	-		PFLU_RS07560	0.24	+2.0
1,678,337	-		PFLU_RS07560	0.24	+0.6
1,678,450	+		PFLU_RS07560	0.40	-0.3
1,678,450	+		PFLU_RS07560	0.40	-3.0
1,678,450	+		PFLU_RS07560	0.40	-0.8
1,678,450	+		PFLU_RS07560	0.40	-0.5
1,678,451	-		PFLU_RS07560	0.41	-0.4
1,678,543	+		PFLU_RS07560	0.54	-0.3
1,678,543	+		PFLU_RS07560	0.54	-3.0
1,678,544	-		PFLU_RS07560	0.54	+3.6
1,678,584	+		PFLU_RS07560	0.59	-1.1
1,678,765	+		PFLU_RS07560	0.85	-0.3
1,678,765	+		PFLU_RS07560	0.85	-0.8
1,678,766	-		PFLU_RS07560	0.85	+0.0
1,678,766	-		PFLU_RS07560	0.85	-1.4
1,679,070	+		PFLU_RS07565	0.22	-1.7
1,679,070	+		PFLU_RS07565	0.22	-2.2
1,679,071	-		PFLU_RS07565	0.23	-1.0
1,679,071	-		PFLU_RS07565	0.23	-0.1
1,679,071	-		PFLU_RS07565	0.23	+0.4
1,679,071	-		PFLU_RS07565	0.23	-0.8
1,679,071	-		PFLU_RS07565	0.23	-0.5
1,679,071	-		PFLU_RS07565	0.23	+0.5
1,679,071	-		PFLU_RS07565	0.23	-1.3
1,679,071	-		PFLU_RS07565	0.23	-2.5
1,679,109	+		PFLU_RS07565	0.27	+0.3
1,679,109	+		PFLU_RS07565	0.27	-1.0
1,679,109	+		PFLU_RS07565	0.27	-2.0
1,679,109	+		PFLU_RS07565	0.27	-0.8
1,679,110	-		PFLU_RS07565	0.27	+0.7
1,679,110	-		PFLU_RS07565	0.27	-0.4
1,679,110	-		PFLU_RS07565	0.27	-0.3
1,679,110	-		PFLU_RS07565	0.27	-0.5
1,679,110	-		PFLU_RS07565	0.27	+1.5
1,679,110	-		PFLU_RS07565	0.27	-1.8
1,679,110	-		PFLU_RS07565	0.27	-2.5
1,679,111	+		PFLU_RS07565	0.27	+0.0
1,679,112	-		PFLU_RS07565	0.27	+0.5
1,679,112	-		PFLU_RS07565	0.27	+0.5
1,679,148	-		PFLU_RS07565	0.31	-2.3