Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25545
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 5,308,950 | + | -0.0 | |||
| 5,309,026 | - | +1.6 | |||
| 5,309,031 | - | BWI76_RS25545 | 0.12 | +0.7 | |
| 5,309,136 | + | BWI76_RS25545 | 0.55 | +0.9 | |
| 5,309,182 | + | BWI76_RS25545 | 0.74 | +0.0 | |
| 5,309,192 | + | BWI76_RS25545 | 0.78 | +1.1 | |
| 5,309,235 | - | -0.1 | |||
| 5,309,294 | - | -1.0 | |||
| 5,309,405 | - | BWI76_RS25550 | 0.12 | -0.3 | |
| 5,309,405 | - | BWI76_RS25550 | 0.12 | +0.5 | |
| 5,309,405 | - | BWI76_RS25550 | 0.12 | -0.2 | |
| 5,309,744 | + | BWI76_RS25550 | 0.35 | +0.3 | |
| 5,309,745 | + | BWI76_RS25550 | 0.35 | +0.2 | |
| 5,309,747 | + | BWI76_RS25550 | 0.35 | +0.8 | |
| 5,309,799 | + | BWI76_RS25550 | 0.39 | -0.2 | |
| 5,309,807 | - | BWI76_RS25550 | 0.39 | +0.8 | |
| 5,309,974 | + | BWI76_RS25550 | 0.51 | -0.5 | |
| 5,309,982 | - | BWI76_RS25550 | 0.51 | -0.6 | |
| 5,309,982 | - | BWI76_RS25550 | 0.51 | +0.4 | |
| 5,310,121 | - | BWI76_RS25550 | 0.61 | +0.0 | |
| 5,310,213 | + | BWI76_RS25550 | 0.67 | -1.3 |
Or see this region's nucleotide sequence