Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24740
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
5,160,168 | + | BWI76_RS24735 | 0.59 | -0.7 | |
5,160,175 | + | BWI76_RS24735 | 0.60 | -0.6 | |
5,160,183 | - | BWI76_RS24735 | 0.60 | -0.3 | |
5,160,251 | - | BWI76_RS24735 | 0.65 | -0.0 | |
5,160,285 | - | BWI76_RS24735 | 0.68 | -1.3 | |
5,160,291 | - | BWI76_RS24735 | 0.68 | -0.8 | |
5,160,291 | - | BWI76_RS24735 | 0.68 | +0.2 | |
5,160,350 | - | BWI76_RS24735 | 0.73 | -0.6 | |
5,160,387 | + | BWI76_RS24735 | 0.76 | -0.1 | |
5,160,659 | + | -0.0 | |||
5,160,944 | - | BWI76_RS24740 | 0.15 | -2.9 | |
5,161,454 | + | BWI76_RS24740 | 0.80 | -1.5 | |
5,161,472 | - | BWI76_RS24740 | 0.83 | -1.0 | |
5,161,621 | - | +0.5 | |||
5,161,652 | - | -1.6 | |||
5,161,678 | + | -2.4 | |||
5,161,688 | + | -0.1 | |||
5,161,836 | - | -1.6 | |||
5,161,903 | - | -0.2 | |||
5,161,926 | + | +0.7 | |||
5,161,964 | + | +0.6 | |||
5,162,032 | - | BWI76_RS24745 | 0.13 | +0.1 | |
5,162,100 | - | BWI76_RS24745 | 0.24 | -0.0 | |
5,162,194 | + | BWI76_RS24745 | 0.38 | -0.2 | |
5,162,238 | + | BWI76_RS24745 | 0.44 | -0.0 | |
5,162,451 | + | BWI76_RS24745 | 0.76 | +0.7 |
Or see this region's nucleotide sequence