Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24070
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 5,021,769 | + | +0.1 | |||
| 5,021,875 | - | BWI76_RS24065 | 0.14 | -0.1 | |
| 5,022,161 | + | BWI76_RS24065 | 0.54 | +0.2 | |
| 5,022,161 | + | BWI76_RS24065 | 0.54 | +0.2 | |
| 5,022,393 | + | BWI76_RS24065 | 0.87 | -0.1 | |
| 5,022,448 | - | +1.1 | |||
| 5,022,678 | + | BWI76_RS24070 | 0.14 | -0.7 | |
| 5,022,678 | + | BWI76_RS24070 | 0.14 | -1.1 | |
| 5,022,827 | + | BWI76_RS24070 | 0.34 | +1.5 | |
| 5,022,891 | - | BWI76_RS24070 | 0.43 | +2.1 | |
| 5,023,064 | + | BWI76_RS24070 | 0.67 | +0.6 | |
| 5,023,265 | - | +0.3 | |||
| 5,023,310 | + | -0.4 | |||
| 5,023,390 | - | -2.8 | |||
| 5,023,483 | - | BWI76_RS24075 | 0.16 | +0.9 | |
| 5,023,757 | - | BWI76_RS24075 | 0.45 | -0.7 | |
| 5,023,773 | - | BWI76_RS24075 | 0.47 | +0.9 | |
| 5,023,816 | - | BWI76_RS24075 | 0.51 | +0.9 | |
| 5,023,821 | - | BWI76_RS24075 | 0.52 | -0.9 | |
| 5,023,916 | + | BWI76_RS24075 | 0.62 | -2.8 | |
| 5,024,250 | + | -0.6 | |||
| 5,024,258 | - | -0.4 |
Or see this region's nucleotide sequence