Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23325
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 4,863,667 | + | BWI76_RS23315 | 0.74 | -0.5 | |
| 4,863,927 | + | BWI76_RS23315 | 0.87 | +2.9 | |
| 4,864,174 | - | +0.2 | |||
| 4,864,174 | - | -0.1 | |||
| 4,864,313 | - | BWI76_RS23320 | 0.38 | +0.3 | |
| 4,864,485 | + | BWI76_RS23325 | 0.11 | +0.4 | |
| 4,864,485 | + | BWI76_RS23325 | 0.11 | +0.7 | |
| 4,864,495 | + | BWI76_RS23325 | 0.15 | +1.6 | |
| 4,864,529 | + | BWI76_RS23325 | 0.26 | +0.3 | |
| 4,864,729 | + | +0.4 | |||
| 4,864,737 | - | +0.8 | |||
| 4,864,753 | - | +0.3 | |||
| 4,865,021 | + | BWI76_RS23330 | 0.18 | +0.9 | |
| 4,865,038 | + | BWI76_RS23330 | 0.19 | -2.3 | |
| 4,865,092 | + | BWI76_RS23330 | 0.25 | -3.6 | |
| 4,865,276 | - | BWI76_RS23330 | 0.43 | +1.0 | |
| 4,865,306 | - | BWI76_RS23330 | 0.46 | -2.1 | |
| 4,865,395 | - | BWI76_RS23330 | 0.55 | -1.5 | |
| 4,865,440 | + | BWI76_RS23330 | 0.59 | -0.0 | |
| 4,865,517 | + | BWI76_RS23330 | 0.67 | +0.1 |
Or see this region's nucleotide sequence