Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22090
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,610,281 | - | BWI76_RS22080 | 0.39 | +0.5 | |
4,610,350 | + | BWI76_RS22080 | 0.48 | +0.3 | |
4,610,360 | - | BWI76_RS22080 | 0.50 | +0.7 | |
4,610,433 | + | BWI76_RS22080 | 0.59 | +0.6 | |
4,610,433 | + | BWI76_RS22080 | 0.59 | +0.3 | |
4,610,523 | + | BWI76_RS22080 | 0.71 | -0.1 | |
4,610,538 | - | BWI76_RS22080 | 0.73 | -1.4 | |
4,610,557 | - | BWI76_RS22080 | 0.76 | -1.1 | |
4,610,663 | + | +0.4 | |||
4,610,697 | + | -0.4 | |||
4,610,699 | - | -1.0 | |||
4,610,710 | - | +0.8 | |||
4,610,737 | + | -2.7 | |||
4,610,964 | - | BWI76_RS22085 | 0.71 | -1.9 | |
4,611,016 | + | BWI76_RS22085 | 0.87 | -0.1 | |
4,611,016 | + | BWI76_RS22085 | 0.87 | -0.1 | |
4,611,504 | + | BWI76_RS22090 | 0.66 | -1.9 | |
4,611,570 | + | BWI76_RS22090 | 0.79 | -2.4 | |
4,611,615 | + | BWI76_RS22090 | 0.87 | -0.3 | |
4,611,683 | + | -2.2 | |||
4,612,093 | - | +1.9 | |||
4,612,204 | - | BWI76_RS22095 | 0.33 | +0.5 | |
4,612,390 | - | BWI76_RS22095 | 0.49 | +0.6 |
Or see this region's nucleotide sequence