Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16635
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,443,215 | + | -0.4 | |||
3,443,399 | + | BWI76_RS16630 | 0.10 | -0.4 | |
3,443,415 | + | BWI76_RS16630 | 0.12 | -0.3 | |
3,443,588 | + | BWI76_RS16630 | 0.33 | -0.1 | |
3,443,596 | - | BWI76_RS16630 | 0.34 | +0.1 | |
3,443,596 | - | BWI76_RS16630 | 0.34 | -1.4 | |
3,443,672 | - | BWI76_RS16630 | 0.44 | +0.4 | |
3,443,779 | - | BWI76_RS16630 | 0.57 | +0.4 | |
3,443,952 | + | BWI76_RS16630 | 0.79 | +0.6 | |
3,444,163 | - | -0.4 | |||
3,444,163 | - | +0.2 | |||
3,444,163 | - | -0.4 | |||
3,444,184 | + | -0.7 | |||
3,444,202 | - | -0.2 | |||
3,444,637 | - | BWI76_RS16635 | 0.67 | -1.5 | |
3,444,637 | - | BWI76_RS16635 | 0.67 | -1.4 | |
3,444,738 | - | BWI76_RS16635 | 0.83 | -1.4 | |
3,444,963 | + | +0.2 | |||
3,445,112 | - | +0.5 | |||
3,445,124 | + | +0.5 | |||
3,445,320 | - | BWI76_RS16640 | 0.39 | +0.1 | |
3,445,342 | - | BWI76_RS16640 | 0.43 | -1.3 |
Or see this region's nucleotide sequence