Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16360
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,393,209 | + | BWI76_RS16350 | 0.28 | -0.6 | |
3,393,219 | - | BWI76_RS16350 | 0.31 | -1.1 | |
3,393,243 | + | BWI76_RS16350 | 0.36 | +0.8 | |
3,393,254 | + | BWI76_RS16350 | 0.39 | -0.5 | |
3,393,293 | - | BWI76_RS16350 | 0.47 | +0.9 | |
3,393,295 | - | BWI76_RS16350 | 0.48 | -0.5 | |
3,393,298 | - | BWI76_RS16350 | 0.49 | -1.9 | |
3,393,383 | - | BWI76_RS16350 | 0.68 | -0.0 | |
3,393,533 | + | -0.1 | |||
3,393,551 | - | -1.2 | |||
3,393,672 | - | BWI76_RS16355 | 0.12 | -0.9 | |
3,393,681 | + | BWI76_RS16355 | 0.14 | -0.3 | |
3,393,713 | + | BWI76_RS16355 | 0.19 | -2.9 | |
3,393,970 | + | BWI76_RS16355 | 0.63 | -0.5 | |
3,394,192 | + | +0.7 | |||
3,394,369 | - | BWI76_RS16360 | 0.32 | -2.5 | |
3,394,890 | + | -1.7 | |||
3,395,046 | - | BWI76_RS16365 | 0.14 | +0.3 | |
3,395,263 | - | BWI76_RS16365 | 0.25 | -1.8 | |
3,395,451 | + | BWI76_RS16365 | 0.34 | -1.5 | |
3,395,459 | - | BWI76_RS16365 | 0.34 | +0.1 | |
3,395,459 | - | +0.1 | |||
3,395,750 | - | BWI76_RS16365 | 0.48 | -1.4 |
Or see this region's nucleotide sequence