Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16120
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 3,344,316 | - | BWI76_RS16115 | 0.48 | +0.5 | |
| 3,344,316 | - | BWI76_RS16115 | 0.48 | +0.1 | |
| 3,344,603 | + | BWI76_RS16115 | 0.65 | -2.1 | |
| 3,344,637 | + | BWI76_RS16115 | 0.68 | +1.1 | |
| 3,344,689 | - | BWI76_RS16115 | 0.71 | +0.6 | |
| 3,344,746 | - | BWI76_RS16115 | 0.74 | -0.6 | |
| 3,345,032 | + | +0.4 | |||
| 3,345,032 | + | -1.0 | |||
| 3,345,228 | + | +0.3 | |||
| 3,345,392 | - | BWI76_RS16120 | 0.35 | -0.5 | |
| 3,345,440 | + | BWI76_RS16120 | 0.47 | +1.1 | |
| 3,345,585 | + | BWI76_RS16120 | 0.85 | +0.9 | |
| 3,345,593 | - | BWI76_RS16120 | 0.87 | +0.1 | |
| 3,345,654 | + | +0.4 | |||
| 3,345,903 | + | BWI76_RS16125 | 0.35 | +0.9 | |
| 3,346,488 | - | -1.6 | |||
| 3,346,494 | + | -0.3 |
Or see this region's nucleotide sequence