Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15100

Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
3,161,719	-		BWI76_RS15090	0.69	+0.1
3,161,876	+		BWI76_RS15090	0.89	+2.1
3,161,884	-				+1.5
3,161,975	-				-1.1
3,161,991	+				+0.1
3,162,061	-		BWI76_RS15095	0.13	+0.2
3,162,120	-				+0.1
3,162,120	-		BWI76_RS15095	0.23	+0.0
3,162,229	-		BWI76_RS15095	0.40	-2.1
3,162,229	-		BWI76_RS15095	0.40	-0.8
3,162,545	-		BWI76_RS15095	0.90	+2.4
3,162,652	-				+0.9
3,162,720	-				+0.3
3,162,766	+				-0.2
3,163,103	-		BWI76_RS15100	0.24	+1.1
3,163,149	+		BWI76_RS15100	0.26	+0.5
3,163,200	-				+0.5
3,163,230	-		BWI76_RS15100	0.30	-2.2
3,163,297	+		BWI76_RS15100	0.34	+0.8
3,163,451	+		BWI76_RS15100	0.42	+1.1
3,163,491	+		BWI76_RS15100	0.44	+0.2
3,163,513	+		BWI76_RS15100	0.45	+1.4
3,163,572	-		BWI76_RS15100	0.48	+0.9
3,163,659	+		BWI76_RS15100	0.52	+1.4
3,163,667	-		BWI76_RS15100	0.53	-1.2
3,163,702	+		BWI76_RS15100	0.55	+0.5
3,163,986	-		BWI76_RS15100	0.69	+0.1
3,163,998	+		BWI76_RS15100	0.70	+1.0
3,164,036	-		BWI76_RS15100	0.72	+0.1
3,164,046	-		BWI76_RS15100	0.72	+1.1
3,164,058	-		BWI76_RS15100	0.73	-1.5
3,164,086	+		BWI76_RS15100	0.74	+0.6
3,164,086	+				-0.9
3,164,094	-		BWI76_RS15100	0.75	+2.4
3,164,256	+		BWI76_RS15100	0.83	+0.3
3,164,332	-		BWI76_RS15100	0.87	+0.1
3,164,356	-		BWI76_RS15100	0.88	+0.9
3,164,356	-		BWI76_RS15100	0.88	+2.7
3,164,373	-		BWI76_RS15100	0.89	-1.2
3,164,390	-		BWI76_RS15100	0.90	-1.7
3,164,392	+		BWI76_RS15100	0.90	+1.5
3,164,392	+		BWI76_RS15100	0.90	+4.1
3,164,392	+		BWI76_RS15100	0.90	+0.9
3,164,392	+		BWI76_RS15100	0.90	-0.2
3,164,400	-				-0.5
3,164,400	-				+0.3
3,164,400	-				+0.9
3,164,400	-				-0.1
3,164,400	-				+1.1
3,164,402	+				-0.6
3,164,410	-				+0.4
3,164,426	+				+1.1
3,164,530	+				+0.3
3,164,535	+				-0.9
3,164,557	+				+2.3
3,164,563	+				+0.8
3,164,563	+				+0.0
3,164,565	-				-0.3
3,164,565	-				+0.7
3,164,571	-				-1.5
3,164,571	-				-0.5
3,164,571	-				-0.9
3,164,619	+				+1.7
3,164,619	+				+0.0
3,164,652	-				+0.4
3,164,675	+				+0.3
3,164,810	+		BWI76_RS15105	0.12	-2.3
3,164,843	+		BWI76_RS15105	0.14	+0.1
3,164,844	+		BWI76_RS15105	0.14	+1.1
3,164,857	+		BWI76_RS15105	0.15	-1.1
3,164,933	-		BWI76_RS15105	0.20	+1.1
3,165,129	-		BWI76_RS15105	0.33	-0.3
3,165,152	+		BWI76_RS15105	0.35	+0.4
3,165,154	+		BWI76_RS15105	0.35	+0.1
3,165,165	+		BWI76_RS15105	0.36	+0.5
3,165,180	+		BWI76_RS15105	0.37	+1.3
3,165,180	+		BWI76_RS15105	0.37	-0.2
3,165,223	-		BWI76_RS15105	0.39	-1.1
3,165,279	-		BWI76_RS15105	0.43	-0.8
3,165,284	+		BWI76_RS15105	0.43	-1.5
3,165,284	-		BWI76_RS15105	0.43	+0.1
3,165,294	+		BWI76_RS15105	0.44	+0.4
3,165,294	+		BWI76_RS15105	0.44	+2.1
3,165,294	+		BWI76_RS15105	0.44	+0.9
3,165,302	-		BWI76_RS15105	0.45	+0.4
3,165,302	-		BWI76_RS15105	0.45	+0.8
3,165,302	-		BWI76_RS15105	0.45	+0.4
3,165,302	-		BWI76_RS15105	0.45	+0.5
3,165,302	-		BWI76_RS15105	0.45	-0.7
3,165,302	-		BWI76_RS15105	0.45	+0.8
3,165,373	+				+0.1
3,165,402	+		BWI76_RS15105	0.51	-0.3
3,165,412	+		BWI76_RS15105	0.52	+0.4
3,165,418	+		BWI76_RS15105	0.52	-0.1
3,165,467	-		BWI76_RS15105	0.55	-0.1
3,165,476	+		BWI76_RS15105	0.56	-0.3
3,165,476	+		BWI76_RS15105	0.56	+0.2
3,165,484	-		BWI76_RS15105	0.57	-0.5
3,165,486	+		BWI76_RS15105	0.57	+1.3
3,165,502	-		BWI76_RS15105	0.58	-0.9
3,165,504	+		BWI76_RS15105	0.58	+0.5
3,165,504	+		BWI76_RS15105	0.58	+0.7
3,165,509	+		BWI76_RS15105	0.58	+0.1
3,165,510	-		BWI76_RS15105	0.58	+0.3
3,165,512	-		BWI76_RS15105	0.58	-0.8
3,165,512	-		BWI76_RS15105	0.58	+1.9
3,165,512	-		BWI76_RS15105	0.58	+1.9
3,165,512	-		BWI76_RS15105	0.58	-0.4
3,165,526	-		BWI76_RS15105	0.59	+0.6
3,165,526	-		BWI76_RS15105	0.59	+0.4