Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11840
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,487,964 | + | BWI76_RS11830 | 0.55 | +1.0 | |
2,488,110 | + | BWI76_RS11830 | 0.70 | -0.0 | |
2,488,133 | + | BWI76_RS11830 | 0.72 | +0.6 | |
2,488,242 | + | BWI76_RS11830 | 0.84 | -1.4 | |
2,488,718 | + | BWI76_RS11835 | 0.54 | -0.3 | |
2,488,873 | - | BWI76_RS11835 | 0.88 | -0.2 | |
2,489,110 | + | BWI76_RS11840 | 0.19 | -1.8 | |
2,489,118 | - | BWI76_RS11840 | 0.20 | -6.8 | |
2,489,335 | - | BWI76_RS11840 | 0.46 | -2.0 | |
2,489,732 | + | -3.9 | |||
2,489,811 | + | -3.4 | |||
2,490,020 | - | BWI76_RS11845 | 0.21 | +1.2 | |
2,490,126 | + | BWI76_RS11845 | 0.30 | -5.7 |
Or see this region's nucleotide sequence