Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10690
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,257,928 | + | -0.2 | |||
| 2,257,928 | + | +0.3 | |||
| 2,258,359 | - | BWI76_RS10685 | 0.49 | +0.4 | |
| 2,258,458 | + | BWI76_RS10685 | 0.59 | +0.9 | |
| 2,258,466 | - | BWI76_RS10685 | 0.60 | +0.6 | |
| 2,258,466 | - | BWI76_RS10685 | 0.60 | -0.1 | |
| 2,258,466 | - | BWI76_RS10685 | 0.60 | -0.0 | |
| 2,258,537 | + | BWI76_RS10685 | 0.67 | -0.3 | |
| 2,259,014 | + | BWI76_RS10690 | 0.13 | +0.6 | |
| 2,259,037 | + | BWI76_RS10690 | 0.15 | +0.6 | |
| 2,259,456 | - | BWI76_RS10690 | 0.48 | +0.7 | |
| 2,259,729 | - | BWI76_RS10690 | 0.69 | +0.1 | |
| 2,259,731 | - | BWI76_RS10690 | 0.69 | +0.0 | |
| 2,259,828 | + | BWI76_RS10690 | 0.77 | +0.9 | |
| 2,259,909 | - | BWI76_RS10690 | 0.83 | +0.9 | |
| 2,260,534 | - | BWI76_RS10695 | 0.27 | -0.0 | |
| 2,260,554 | - | BWI76_RS10695 | 0.28 | -0.5 | |
| 2,260,643 | - | BWI76_RS10695 | 0.34 | +0.7 | |
| 2,260,715 | + | BWI76_RS10695 | 0.39 | -0.2 | |
| 2,260,715 | + | BWI76_RS10695 | 0.39 | -0.0 | |
| 2,260,771 | + | BWI76_RS10695 | 0.43 | +0.6 | |
| 2,260,845 | - | BWI76_RS10695 | 0.48 | -0.6 | |
| 2,261,044 | + | BWI76_RS10695 | 0.61 | +0.4 |
Or see this region's nucleotide sequence