Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09930
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,088,679 | - | BWI76_RS09925 | 0.72 | -0.9 | |
2,088,884 | + | BWI76_RS09925 | 0.82 | +1.0 | |
2,089,020 | + | BWI76_RS09925 | 0.89 | +0.1 | |
2,089,173 | - | -0.9 | |||
2,089,481 | + | BWI76_RS09930 | 0.11 | -0.8 | |
2,089,571 | - | -0.6 | |||
2,089,601 | - | BWI76_RS09930 | 0.17 | +0.3 | |
2,089,666 | - | BWI76_RS09930 | 0.21 | -0.5 | |
2,089,707 | + | BWI76_RS09930 | 0.23 | -1.2 | |
2,089,785 | + | BWI76_RS09930 | 0.27 | +1.7 | |
2,089,785 | + | BWI76_RS09930 | 0.27 | -2.3 | |
2,089,882 | - | BWI76_RS09930 | 0.32 | -0.5 | |
2,089,971 | - | BWI76_RS09930 | 0.37 | -1.7 | |
2,090,403 | + | BWI76_RS09930 | 0.59 | -0.2 | |
2,090,615 | - | BWI76_RS09930 | 0.70 | +0.5 | |
2,090,790 | + | BWI76_RS09930 | 0.80 | -0.4 | |
2,090,848 | - | BWI76_RS09930 | 0.83 | -0.2 | |
2,091,184 | + | +0.4 | |||
2,091,477 | + | BWI76_RS09935 | 0.22 | -0.6 | |
2,091,625 | - | BWI76_RS09935 | 0.34 | -2.9 | |
2,091,988 | + | BWI76_RS09935 | 0.62 | -1.0 |
Or see this region's nucleotide sequence