Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09655
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,019,640 | + | BWI76_RS09645 | 0.89 | -1.0 | |
2,019,688 | + | -1.8 | |||
2,019,943 | + | +1.0 | |||
2,020,109 | + | -0.2 | |||
2,020,122 | - | -0.6 | |||
2,020,168 | - | BWI76_RS09650 | 0.10 | -1.0 | |
2,020,171 | + | BWI76_RS09650 | 0.12 | +0.0 | |
2,020,171 | + | BWI76_RS09650 | 0.12 | +0.6 | |
2,020,179 | - | BWI76_RS09650 | 0.15 | -1.9 | |
2,020,189 | - | BWI76_RS09650 | 0.20 | -4.0 | |
2,020,204 | - | BWI76_RS09650 | 0.28 | -0.1 | |
2,020,204 | - | BWI76_RS09650 | 0.28 | +2.0 | |
2,020,204 | - | BWI76_RS09650 | 0.28 | -2.6 | |
2,020,211 | + | BWI76_RS09650 | 0.32 | -0.6 | |
2,020,243 | + | BWI76_RS09650 | 0.47 | -0.6 | |
2,020,254 | + | BWI76_RS09650 | 0.53 | -2.5 | |
2,020,408 | + | BWI76_RS09655 | 0.27 | -1.4 | |
2,020,452 | + | BWI76_RS09655 | 0.36 | -1.8 | |
2,020,460 | - | BWI76_RS09655 | 0.37 | -0.3 | |
2,020,465 | - | BWI76_RS09655 | 0.38 | -0.6 | |
2,020,481 | + | BWI76_RS09655 | 0.41 | -1.3 | |
2,020,707 | - | BWI76_RS09655 | 0.87 | -1.9 |
Or see this region's nucleotide sequence